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Neuronal dendrites form densely branched tree architectures through which mitochondria must be distributed to supply the cell's energetic needs. Dendritic mitochondria circulate through the tree, undergoing fusion and fission to form…

Biological Physics · Physics 2024-05-09 Mario Hidalgo-Soria , Elena F. Koslover

Neuronal morphology is an essential element for brain activity and function. We take advantage of current availability of brain-wide neuron digital reconstructions of the Pyramidal cells from a mouse brain, and analyze several emergent…

Dynamical Systems · Mathematics 2018-10-09 Congping Lin , Yuanfei Huang , Tingwei Quan , Yiwei Zhang

The structure of the axon-dendrite connections of neurons of the brain creates a rich spatial structure in which provided various combinations of signals surrounding neurons. Structure of dendritic trees and shape of dendritic spines allow…

Artificial Intelligence · Computer Science 2014-07-25 Alexey Redozubov

Neocortical pyramidal neurons have many dendrites, and such dendrites are capable of, in isolation of one-another, generating a neuronal spike. It is also now understood that there is a large amount of dendritic growth during the first…

Neurons and Cognition · Quantitative Biology 2022-10-31 William B Levy , Robert A. Baxter

Since they became observable, neuron morphologies have been informally compared with biological trees but they are studied by distinct communities, neuroscientists, and ecologists. The apparent structural similarity suggests there may be…

Neurons and Cognition · Quantitative Biology 2023-07-06 Roozbeh Farhoodi , Phil Wilkes , Anirudh M. Natarajan , Samantha Ing-Esteves , Julie L. Lefebvre , Mathias Disney , Konrad P. Kording

Dendritic spines, which are small protrusions on the dendrites of a neuron, are of interest in neuroscience as they are related to cognitive processes such as learning and memory. We analyse the distribution of spine locations on six…

Methodology · Statistics 2020-10-27 Heidi S. Christensen , Jesper Møller

The brain can learn to solve a wide range of tasks with high temporal and energetic efficiency. However, most biological models are composed of simple single compartment neurons and cannot achieve the state-of-art performances of artificial…

Neurons and Cognition · Quantitative Biology 2026-04-13 Cristiano Capone , Cosimo Lupo , Paolo Muratore , Pier Stanislao Paolucci

Understanding and predicting the progression of neurodegenerative diseases remains a major challenge in medical AI, with significant implications for early diagnosis, disease monitoring, and treatment planning. However, most available…

Computer Vision and Pattern Recognition · Computer Science 2026-04-27 Nivetha Jayakumar , Swakshar Deb , Bahram Jafrasteh , Qingyu Zhao , Miaomiao Zhang

The brain can efficiently learn a wide range of tasks, motivating the search for biologically inspired learning rules for improving current artificial intelligence technology. Most biological models are composed of point neurons, and cannot…

Neurons and Cognition · Quantitative Biology 2026-04-13 Cristiano Capone , Cosimo Lupo , Paolo Muratore , Pier Stanislao Paolucci

I consider a topographic projection between two neuronal layers with different densities of neurons. Given the number of output neurons connected to each input neuron (divergence) and the number of input neurons synapsing on each output…

Disordered Systems and Neural Networks · Physics 2007-05-23 Dmitri B. Chklovskii

In this paper, we propose DeepTree, a novel method for modeling trees based on learning developmental rules for branching structures instead of manually defining them. We call our deep neural model situated latent because its behavior is…

Machine Learning · Computer Science 2023-05-10 Xiaochen Zhou , Bosheng Li , Bedrich Benes , Songlin Fei , Sören Pirk

This article highlights specific features of biological neurons and their dendritic trees, whose adoption may help advance artificial neural networks used in various machine learning applications. Advancements could take the form of…

Neurons and Cognition · Quantitative Biology 2021-06-15 Spyridon Chavlis , Panayiota Poirazi

Computations on the dendritic trees of neurons have important constraints. Voltage dependent conductances in dendrites are not similar to arbitrary direct-current generation, they are the basis for dendritic nonlinearities and they do not…

Neurons and Cognition · Quantitative Biology 2021-08-12 Ilenna Simone Jones , Konrad Paul Kording

Dendritic computation endows biological neurons with rich nonlinear integration and high representational capacity, yet it is largely missing in existing deep spiking neural networks (SNNs). Although detailed multi-compartment models can…

Neural and Evolutionary Computing · Computer Science 2025-12-23 Yifan Huang , Wei Fang , Zhengyu Ma , Guoqi Li , Yonghong Tian

Electropolymerization is a bottom-up materials engineering process of micro and nano-scale that utilizes electrical signals to deposit conducting dendrites' morphologies by a redox reaction in the liquid phase. It resembles synaptogenesis…

Disordered Systems and Neural Networks · Physics 2021-07-08 Ankush Kumar , Kamila Janzakova , Yannick Coffinier , Sébastien Pecqueur , Fabien Alibart

A single neuron receives an extensive array of synaptic inputs through its dendrites, raising the fundamental question of how these inputs undergo integration and summation, culminating in the initiation of spikes in the soma. Experimental…

Neurons and Cognition · Quantitative Biology 2025-04-30 Yuanhong Tang , Shanshan Jia , Tiejun Huang , Zhaofei Yu , Jian K. Liu

This paper introduces a new combinatorial framework for modeling the growth of binary trees through a discrete evolution process that incorporates a growing rule and an extinction rule. Building upon the theory of increasingly labeled…

Combinatorics · Mathematics 2026-03-30 Olivier Bodini , Antoine Genitrini , Khaydar Nurligareev

It was recently observed by de Vienne et al. that a simple square root transformation of distances between taxa on a phylogenetic tree allowed for an embedding of the taxa into Euclidean space. While the justification for this was based on…

Populations and Evolution · Quantitative Biology 2016-05-04 Mark Layer , John A. Rhodes

Since its foundations, more than one hundred years ago, the field of structural biology has strived to understand and analyze the properties of molecules and their interactions by studying the structure that they take in 3D space. However,…

Biomolecules · Quantitative Biology 2023-02-27 Gabriele Corso

In many normative theories of synaptic plasticity, weight updates implicitly depend on the chosen parametrization of the weights. This problem relates, for example, to neuronal morphology: synapses which are functionally equivalent in terms…

Neurons and Cognition · Quantitative Biology 2022-02-25 Elena Kreutzer , Walter M. Senn , Mihai A. Petrovici
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