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Estimating the Shannon information associated with individual neurons is a non-trivial problem. Three key methods used to estimate the mutual information between neuron inputs and outputs are described, and a list of further readings is…

Neurons and Cognition · Quantitative Biology 2023-04-05 James V Stone

From a traditional point of view, the value of information does not change during transmission. The Shannon information theory considers information transmission as a statistical phenomenon for measuring the communication channel capacity.…

Networking and Internet Architecture · Computer Science 2019-07-04 Min Chen , Yixue Hao , Hamid Gharavi , Victor C. M. Leung

Shannon information theory provides various measures of so-called "syntactic information", which reflect the amount of statistical correlation between systems. In contrast, the concept of "semantic information" refers to those correlations…

Statistical Mechanics · Physics 2022-11-22 Artemy Kolchinsky , David H. Wolpert

A novel definition of the stimulus-specific information is presented, which is particularly useful when the stimuli constitute a continuous and metric set, as for example, position in space. The approach allows one to build the spatial…

Disordered Systems and Neural Networks · Physics 2007-05-23 Michele Bezzi , Ines Samengo , Stefan Leutgeb , Sheri Mizumori

Most psychophysical experiments discard half the data collected. Specifically, experiments discard reaction time data, and use binary responses (e.g. yes/no) to measure performance. Here, Shannon's information theory is used to define…

Neurons and Cognition · Quantitative Biology 2021-12-14 James V Stone

We study the capacity with which a system of independent neuron-like units represents a given set of stimuli. We assume that each neuron provides a fixed amount of information, and that the information provided by different neurons has a…

Disordered Systems and Neural Networks · Physics 2007-05-23 Ines Samengo

Information theory is a practical and theoretical framework developed for the study of communication over noisy channels. Its probabilistic basis and capacity to relate statistical structure to function make it ideally suited for studying…

Neurons and Cognition · Quantitative Biology 2015-01-09 Robin A. A. Ince , Stefano Panzeri , Simon R. Schultz

The data for many classification problems, such as pattern and speech recognition, follow mixture distributions. To quantify the optimum performance for classification tasks, the Shannon mutual information is a natural information-theoretic…

Signal Processing · Electrical Eng. & Systems 2022-06-22 Yijun Ding , Amit Ashok

After Shannon, entropy becomes a fundamental quantity to describe not only uncertainity or chaos of a system but also information carried by the system. Shannon's important discovery is to give a mathematical expression of the mutual…

Quantum Physics · Physics 2007-05-23 Masanori Ohya

Quantifying cooperation or synergy among random variables in predicting a single target random variable is an important problem in many complex systems. We review three prior information-theoretic measures of synergy and introduce a novel…

Information Theory · Computer Science 2014-04-02 Virgil Griffith , Christof Koch

We explore a few common models on how correlations affect information. The main model considered is the Shannon mutual information $I(S:R_1,\cdots, R_i)$ over distributions with marginals $P_{S,R_i}$ fixed for each $i$, with the analogy in…

Information Theory · Computer Science 2024-05-27 Ching-Peng Huang

To understand sensory coding, we must ask not only how much information neurons encode, but also what that information is about. This requires decomposing mutual information into contributions from individual stimuli and stimulus features:…

Neurons and Cognition · Quantitative Biology 2025-10-23 Steeve Laquitaine , Simone Azeglio , Carlo Paris , Ulisse Ferrari , Matthew Chalk

Information theory, introduced by Shannon, has been extremely successful and influential as a mathematical theory of communication. Shannon's notion of information does not consider the meaning of the messages being communicated but only…

Neurons and Cognition · Quantitative Biology 2024-12-17 Alireza Zaeemzadeh , Giulio Tononi

Biologists measure information in different ways. Neurobiologists and researchers in bioinformatics often measure information using information-theoretic measures such as Shannon's entropy or mutual information. Behavioral biologists and…

Populations and Evolution · Quantitative Biology 2007-07-13 Carl T. Bergstrom , Michael Lachmann

Mutual information $I(X;Y)$ is a useful definition in information theory to estimate how much information the random variable $Y$ holds about the random variable $X$. One way to define the mutual information is by comparing the joint…

Information Theory · Computer Science 2022-04-14 Bulut Kuskonmaz , Jaron Skovsted Gundersen , Rafal Wisniewski

We characterize mutual information as the unique map on ordered pairs of random variables satisfying a set of axioms similar to those of Faddeev's characterization of the Shannon entropy. There is a new axiom in our characterization however…

Information Theory · Computer Science 2022-11-30 James Fullwood

Correlations disguised in various forms underlie a host of important phenomena in classical and quantum systems, such as information and energy exchanges. The quantum mutual information and the norm of the correlation matrix are both…

Quantum Physics · Physics 2020-04-15 S. Alipour , S. Tuohino , A. T. Rezakhani , T. Ala-Nissila

In a classical measurement the Shannon information is a natural measure of our ignorance about properties of a system. There, observation removes that ignorance in revealing properties of the system which can be considered to preexist prior…

Quantum Physics · Physics 2009-02-05 Caslav Brukner , Anton Zeilinger

Semantic communication, regarded as the breakthrough beyond the Shannon paradigm, aims at the successful transmission of semantic information conveyed by the source rather than the accurate reception of each single symbol or bit regardless…

Information Theory · Computer Science 2022-06-28 Zhijin Qin , Xiaoming Tao , Jianhua Lu , Wen Tong , Geoffrey Ye Li

The notion of information pervades informal descriptions of biological systems, but formal treatments face the problem of defining a quantitative measure of information rooted in a concept of fitness, which is itself an elusive notion.…

Populations and Evolution · Quantitative Biology 2015-05-20 Olivier Rivoire , Stanislas Leibler
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