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Estimating the geographical range of a species from sparse observations is a challenging and important geospatial prediction problem. Given a set of locations where a species has been observed, the goal is to build a model to predict…

Exoplanet atmospheric modeling is advancing from chemically diverse one-dimensional (1D) models to three-dimensional (3D) global circulation models (GCMs), which are crucial for interpreting observations from facilities like the James Webb…

Earth and Planetary Astrophysics · Physics 2024-12-06 A. Lira-Barria , J. N. Harvey , T. Konings , R. Baeyens , C. Henríquez , L. Decin , O. Venot , R. Veillet

Exploring the climate impacts of various anthropogenic emissions scenarios is key to making informed decisions for climate change mitigation and adaptation. State-of-the-art Earth system models can provide detailed insight into these…

Atmospheric and Oceanic Physics · Physics 2024-01-23 William Yik , Sam J. Silva , Andrew Geiss , Duncan Watson-Parris

The software program BAMM has been widely used to study the dynamics of speciation, extinction, and phenotypic evolution on phylogenetic trees. The program implements a model-based clustering algorithm to identify clades that share common…

Quantitative Methods · Quantitative Biology 2017-11-10 Daniel L Rabosky

We study a class of weakly identifiable location-scale mixture models for which the maximum likelihood estimates based on $n$ i.i.d. samples are known to have lower accuracy than the classical $n^{- \frac{1}{2}}$ error. We investigate…

Statistics Theory · Mathematics 2021-11-17 Raaz Dwivedi , Nhat Ho , Koulik Khamaru , Martin J. Wainwright , Michael I. Jordan , Bin Yu

Ecological systems are governed by complex interactions which are mainly nonlinear. In order to capture this complexity and nonlinearity, statistical models recently gained popularity. However, although these models are commonly applied in…

Quantitative Methods · Quantitative Biology 2011-07-29 Can Ozan Tan , Uygar Ozesmi , Meryem Beklioglu , Esra Per , Bahtiyar Kurt

Ecologists have long suspected that species are more likely to interact if their traits match in a particular way. For example, a pollination interaction may be more likely if the proportions of a bee's tongue fit a plant's flower shape.…

Populations and Evolution · Quantitative Biology 2019-11-05 Maximilian Pichler , Virginie Boreux , Alexandra-Maria Klein , Matthias Schleuning , Florian Hartig

Due to climate-induced changes, many habitats are experiencing range shifts away from their traditional geographic locations (Piguet, 2011). We propose a solution to accurately model whether bird species are present in a specific habitat…

Artificial Intelligence · Computer Science 2025-07-16 Emir Durakovic , Min-Hong Shih

In this study, we explore the application of Physics-Informed Neural Networks (PINNs) to the analysis of bifurcation phenomena in ecological migration models. By integrating the fundamental principles of diffusion-advection-reaction…

Chaotic Dynamics · Physics 2025-11-25 Lujie Yin , Xing Lv

1.) Spatio-temporal datasets that are difficult to analyze are common in ecological surveys. There are software packages available to analyze these datasets, but many of them require advanced coding skills. There is a growing need for easy…

Methodology · Statistics 2021-10-07 Ethan Lawler , Chris Field , Joanna Mills Flemming

In many scientific disciplines, coarse-grained causal models are used to explain and predict the dynamics of more fine-grained systems. Naturally, such models require appropriate macrovariables. Automated procedures to detect suitable…

Machine Learning · Computer Science 2021-11-30 Benedikt Höltgen

The demand for high-resolution information on climate change is critical for accurate projections and decision-making. Presently, this need is addressed through high-resolution climate models or downscaling. High-resolution models are…

Improving predictive understanding of Earth system variability and change requires data-model integration. Efficient data-model integration for complex models requires surrogate modeling to reduce model evaluation time. However, building a…

Machine Learning · Statistics 2019-01-17 Dan Lu , Daniel Ricciuto

Savannahs are vital ecosystems whose sustainability is endangered by the spread of woody plants. This research targets the accurate mapping of fractional woody cover (FWC) at the species level in a South African savannah, using EnMAP…

Numerous polluted groundwater sites across the globe require an active remediation strategy to restore natural environmental conditions and local ecosystem. The Engineered Nano-particles (ENPs) have emerged as an efficient reactive agent…

Machine Learning · Computer Science 2022-11-08 Shikhar Nilabh , Fidel Grandia

The increasing demand for high-speed and reliable wireless networks has driven advancements in technologies such as millimeter-wave and 5G radios, which requires efficient planning and timely deployment of wireless access points. A critical…

Networking and Internet Architecture · Computer Science 2025-01-14 Xuanhao Luo , Zhizhen Li , Zhiyuan Peng , Mingzhe Chen , Yuchen Liu

The detection of rare variants is important for understanding the genetic heterogeneity in mixed samples. Recently, next-generation sequencing (NGS) technologies have enabled the identification of single nucleotide variants (SNVs) in mixed…

Genomics · Quantitative Biology 2016-04-25 Fan Zhang , Patrick Flaherty

Lifemapper (http://www.lifemapper.org) is a predictive electronic atlas of the Earth's biological biodiversity. Using a screensaver version of the GARP genetic algorithm for modeling species distributions, Lifemapper harnesses vast…

Quantitative Methods · Quantitative Biology 2011-11-09 David R. B. Stockwell , James H. Beach , Aimee Stewart , Gregory Vorontsov , David Vieglais , Ricardo Scachetti Pereira

The Analog Ensemble (AnEn) method tries to estimate the probability distribution of the future state of the atmosphere with a set of past observations that correspond to the best analogs of a deterministic Numerical Weather Prediction…

Machine Learning · Computer Science 2019-09-30 Alessandro Fanfarillo , Behrooz Roozitalab , Weiming Hu , Guido Cervone

Recently there has been growing interest in the use of Maximum Relative Entropy (MaxREnt) as a tool for statistical inference in ecology. In contrast, here we propose MaxREnt as a tool for applying statistical mechanics to ecology. We use…

Populations and Evolution · Quantitative Biology 2007-12-13 Roderick C. Dewar , Annabel Porte