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Related papers: Excluded-Volume Effects in Tethered-Particle Exper…

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We study the effect of varying the mass and volume fraction of a suspension of rigid spheres dispersed in a turbulent channel flow. We performed several Direct Numerical Simulations using an Immersed Boundary Method for finite-size…

Fluid Dynamics · Physics 2016-04-28 Walter Fornari , Alberto Formenti , Francesco Picano , Luca Brandt

We propose a three dimensional mechanical model of embryonic tissue dynamics. Mechanically coupled adherent cells are represented as particles interconnected with elastic beams which can exert non-central forces and torques. Tissue…

Biological Physics · Physics 2015-06-22 Andras Czirok , Dona Greta Isai

Using molecular dynamic simulation, we study the stretching of an adsorbed homopolymer in a poor solvent with one end held at a distance $z_e$ from the substrate. We measure the vertical force $f$ on the end of the chain as a function of…

Soft Condensed Matter · Physics 2009-11-10 Franck Celestini , Thoma Frisch , Xabier Oyharcabal

We present a numerical study of noncolloidal spherical and rigid particles suspended in Newtonian, shear thinning and shear thickening fluids employing an Immersed Boundary Method. We consider a linear Couette configuration to explore a…

Fluid Dynamics · Physics 2018-08-29 Dhiya Alghalibi , Iman Lashgari , Luca Brandt , Sarah Hormozi

We explore the consequences of the excluded volume interaction of hard spheres at high densities and present a theory for excited granular materials. We first demonstrate that, in the presence of gravity, the granular density crosses over…

Materials Science · Physics 2007-05-23 Daniel C. Hong

We study the effect of confinement on glassy liquids using Random First Order Transition theory as framework. We show that the characteristic length-scale above which confinement effects become negligible is related to the point-to-set…

Disordered Systems and Neural Networks · Physics 2013-10-01 C. Cammarota , G. Gradenigo , G. Biroli

The mechanical properties of a disordered heterogeneous medium depend, in general, on a complex interplay between multiple length scales. Connecting local interactions to macroscopic observables, such as stiffness or fracture, is thus…

Soft Condensed Matter · Physics 2021-06-17 Arnaud Hemmerle , Yuta Yamaguchi , Marcin Makowski , Oliver Bäumchen , Lucas Goehring

We study the interaction of two parallel rigid cylinders on the surface of a thin elastic film supported on a pool of liquid. The excess energy of the surface due to the curvature of the stretched film induces attraction of the cylinders…

Soft Condensed Matter · Physics 2014-08-08 Aditi Chakrabarti , Manoj K. Chaudhury

The field theory of self-avoiding tethered membranes still poses major challenges. In this article, we report progress on the toy-model of a manifold repelled by a single point. Our approach allows to sum the perturbation expansion in the…

Statistical Mechanics · Physics 2009-11-10 Henryk A. Pinnow , Kay J. Wiese

The number of configurations of a polymer is reduced in the presence of a barrier or an obstacle. The resulting loss of entropy adds a repulsive component to other forces generated by interaction potentials. When the obstructions are scale…

Soft Condensed Matter · Physics 2015-06-11 Mohammad F. Maghrebi , Yacov Kantor , Mehran Kardar

Bottle brushes are polymeric macromolecules made of a linear polymeric backbone grafted with side chains. The choice of the grafting density {\sigma}g, the length ns the grafted side chains and their chemical nature fully determines the…

Soft Condensed Matter · Physics 2019-08-09 P. Corsi , E. Roma , T. Gasperi , F. Bruni , B. Capone

We examine the budding of a nanoscale particle through a lipid bilayer using molecular dynamics simulations, free energy calculations, and an elastic theory, with the aim of determining the extent to which equilibrium elasticity theory can…

Subcellular Processes · Quantitative Biology 2012-02-22 Teresa Ruiz-Herrero , Enrique Velasco , Michael F. Hagan

This article presents a novel computational model to study the selective filtering of biological hydrogels due to the surface charge and size of diffusing particles. It is the first model that includes the random 3D fiber orientation and…

A density functional study of the structure of a layer formed by chain molecules pinned to a solid surface is presented. The chains are modeled as freely joined spheres. Segments and all components interact via Lennard-Jones (12-6)…

Soft Condensed Matter · Physics 2012-07-16 M. Borówko , T. Staszewski

We simulate a series of model polymer composites, composed of linear polymer strands and spherical, monodisperse filler particles (FP). These molecular dynamics simulations implement a coarse-grained, bead-spring force field and we vary…

Soft Condensed Matter · Physics 2025-07-09 John J. Karnes , Supun S. Mohottalalage , Amitesh Maiti , Andrew P. Saab , Todd H. Weisgraber

Wave mechanics of a particle in 1-D box (size $= d$) is critically analyzed to reveal its untouched aspects. When the particle rests in its ground state, its zero-point force ($F_o$) produces non-zero strain by modifying the box size from…

Quantum Physics · Physics 2007-05-23 Yatendra S. Jain

By using the blob theory and computer simulations, we investigate the properties of a linear polymer performing a stationary rotational motion around a long impenetrable rod. In particular, in the simulations the rotation is induced by a…

Extrusion is a widely used process for forming pastes into designed shapes, and is central to the manufacture of many industrial products. The extrusion through a square-entry die of a model paste of non-Brownian spheres suspended in a…

Soft Condensed Matter · Physics 2016-08-23 Christopher Ness , Jin Y. Ooi , Jin Sun , Michele Marigo , Paul McGuire , Han Xu , Hugh Stitt

This study determines the volume-fraction reduction of sheared fragile glass-forming liquids. We consider a group of hypothetical systems that consist of particles with anisotropic particle-size modulations yet have almost the same average…

Soft Condensed Matter · Physics 2024-02-06 Akira Furukawa

Single-molecule pulling techniques have emerged as versatile tools for probing the noncovalent forces holding together the secondary and tertiary structure of macromolecules. They also constitute a way to study at the single-molecule level…

Biological Physics · Physics 2013-02-19 Ignacio Franco , Mark A. Ratner , George C. Schatz