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The mechanisms driving the collective movement of cells remain poorly understood. To contribute toward resolving this mystery, a model was formulated to theoretically explore the possible functions of polarized cell-cell adhesion in…

Biological Physics · Physics 2018-04-25 Katsuyoshi Matsushita

Probably the most fundamental processes for biological systems is their ability to create themselves through the use of cell division and cell differentiation. In this work a simple physical model is proposed for biological cell division.…

Biological Physics · Physics 2010-06-22 Eshel Faraggi

Collective cell movement, characterized by multiple cells that are in contact for substantial periods of time and undergo correlated motion, plays a central role in cancer and embryogenesis. Recent imaging experiments have provided…

Biological Physics · Physics 2020-06-03 Sumit Sinha , Abdul N Malmi-Kakkada , Xin Li , Himadri S. Samanta , D. Thirumalai

Magnetospirillum gryphiswaldense is a microorganism with the ability to biomineralize magnetite nanoparticles, called magnetosomes, and arrange them into a chain that behaves like a magnetic compass. Rather than straight lines, magnetosome…

The motility of eukaryotic cells is strongly influenced by their environment, with confined cells often developing qualitatively different motility patterns from those migrating on simple two-dimensional substrates. Recent experiments,…

Cell Behavior · Quantitative Biology 2024-12-24 Pedrom Zadeh , Brian A. Camley

One-dimensional arrays of nucleosomes (DNA-bound histone octamers separated by stretches of linker DNA) fold into higher-order chromatin structures which ultimately make up eukaryotic chromosomes. Chromatin structure formation leads to…

Genomics · Quantitative Biology 2012-06-21 Răzvan V. Chereji , Denis Tolkunov , George Locke , Alexandre V. Morozov

In eukaryotic cells, many motor proteins can move simultaneously on a single microtubule track. This leads to interesting collective phenomena like jamming. Recently we reported ({\it Phys. Rev. Lett. {\bf 95}, 118101 (2005)}) a lattice-gas…

Fluid-structure interactions between active and passive components are important for many biological systems to function. A particular example is chromatin in the cell nucleus, where ATP-powered processes drive coherent motions of the…

Soft Condensed Matter · Physics 2024-02-15 Scott Weady , David B. Stein , Alexandra Zidovska , Michael J. Shelley

Kinesin is a molecular motor that transports cargo along microtubules. The results of many {\it in vitro} experiments on kinesin-1 are described by kinetic models \cite{Clancy11} in which one transition corresponds to the forward motion and…

Statistical Mechanics · Physics 2018-05-30 Gert Knoops , Carlo Vanderzande

We investigate the final stage of cytokinesis in two types of amoeba, pointing out the existence of biphasic furrow contraction. The first phase is characterized by a constant contraction rate, is better studied, and seems universal to a…

Cell Behavior · Quantitative Biology 2007-05-23 D. Biron , P. Libros , D. Sagi , D. Mirelman , E. Moses

During division it is of primary importance for a cell to correctly determine the site of cleavage. The bacterium Escherichia coli divides in the center, producing two daughter cells of equal size. Selection of the center as the correct…

Subcellular Processes · Quantitative Biology 2007-05-23 G. Meacci , K. Kruse

Using computational modelling, we investigate mechanisms of signal transduction focusing on the spindle assembly checkpoint where a single unattached kinetochore is able to signal to prevent cell cycle progression. This inhibitory signal…

Subcellular Processes · Quantitative Biology 2007-05-23 Richard P. Sear , Martin Howard

The dynamics of active matter driven by interacting molecular motors has a non-potential structure at the local scale. However, we show that there exists a quasi-potential effectively describing the collective self-organization of the…

Biological Physics · Physics 2022-06-15 Haythem Chelly , Pierre Recho

Based on experimental observations it is known that various biological cells exhibit a persistent random walk during migration on flat substrates. The persistent random walk is characterized by `stop-and-go' movements : unidirectional…

Subcellular Processes · Quantitative Biology 2009-11-11 B. Nandy , A. Baumgaertner

Constructing physical models of living cells and tissues is an extremely challenging task because of the high complexities of both intra- and intercellular processes. In addition, the force that a single cell generates vanishes in total due…

Soft Condensed Matter · Physics 2019-05-09 Mitsusuke Tarama , Kenji Mori , Ryoichi Yamamoto

Motile cilia are slender, hair-like cellular appendages that spontaneously oscillate under the action of internal molecular motors and are typically found in dense arrays. These active filaments coordinate their beating to generate…

Soft Condensed Matter · Physics 2022-01-28 Brato Chakrabarti , Sebastian Fürthauer , Michael J. Shelley

Epigenetics is a driving force of important and ubiquitous phenomena in nature such as cell differentiation or even metamorphosis. Oppositely to its widespread role, understanding the biophysical principles that allow epigenetics to control…

Soft Condensed Matter · Physics 2020-01-08 Davide Colì , Davide Michieletto , Davide Marenduzzo , Enzo Orlandini

New 13CO data from the BU-FCRAO Milky Way Galactic Ring Survey (GRS) are analyzed to understand the shape and internal motions of molecular clouds. For a sample of more than five hundred molecular clouds, we find that they are…

Astrophysics · Physics 2009-11-13 Jin Koda , Tsuyoshi Sawada , Tetsuo Hasegawa , Nick Scoville

Within cells, vesicles and proteins are actively transported several micrometers along the cytoskeletal filaments. The transport along microtubules is propelled by dynein and kinesin motors, which carry the cargo in opposite directions.…

Biological Physics · Physics 2020-05-20 Robin Jose , Ludger Santen

The architecture of the eukaryotic genome is characterized by a high degree of spatial organization. Chromosomes occupy preferred territories correlated to their state of activity and, yet, displace their genes to interact with remote sites…

Genomics · Quantitative Biology 2015-05-14 Mario Nicodemi , Antonella Prisco