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How are people linked in a highly connected society? Since in many networks a power-law (scale-free) node-degree distribution can be observed, power-law might be seen as a universal characteristics of networks. But this study of…

Physics and Society · Physics 2023-06-22 Matthias Scholz

We give an exact solution for the complete distribution of component sizes in random networks with arbitrary degree distributions. The solution tells us the probability that a randomly chosen node belongs to a component of size s, for any…

Statistical Mechanics · Physics 2007-10-18 M. E. J. Newman

Inspired by empirical studies of networked systems such as the Internet, social networks, and biological networks, researchers have in recent years developed a variety of techniques and models to help us understand or predict the behavior…

Statistical Mechanics · Physics 2015-06-24 M. E. J. Newman

Gene regulatory networks typically have low in-degrees, whereby any given gene is regulated by few of the genes in the network. They also tend to have broad distributions for the out-degree. What mechanisms might be responsible for these…

Molecular Networks · Quantitative Biology 2013-05-29 Z. Burda , A. Krzywicki , O. C. Martin , M. Zagorski

Evolving network models under a dynamic growth rule which comprises the addition and deletion of nodes are investigated. By adding a node with a probability $P_a$ or deleting a node with the probability $P_d=1-P_a$ at each time step, where…

Physics and Society · Physics 2011-08-09 Ke Deng , Ke Hu , Yi Tang

We analyze the fine-grained connections between the average degree and the power-law degree distribution exponent in growing information networks. Our starting observation is a power-law degree distribution with a decreasing exponent and…

Social and Information Networks · Computer Science 2017-01-03 Róbert Pálovics , András A. Benczúr

Cellular function is widely believed to be organized in a modular fashion. On all scales and at all levels of complexity, relatively independent sub-units perform relatively independent sub-tasks of biological function. This functional…

Molecular Networks · Quantitative Biology 2010-12-22 Stefan Pinkert , Joerg Schultz , Joerg Reichardt

Disease awareness in infection dynamics can be modeled with adaptive contact networks whose rewiring rules reflect the attempt by susceptibles to avoid infectious contacts. Simulations of this type of models show an active phase with…

Adaptation and Self-Organizing Systems · Physics 2012-12-06 Stefan Wieland , Tomas Aquino , Ana Nunes

A model for directed networks is proposed and power laws for their in-degree and/or out-degree distributions are derived from the model. It is based on the Barabasi-Albert model and contains two parameters. The parameters serve as…

Physics and Society · Physics 2009-12-16 Shinji Tanimoto

It is suggested that the degree distribution for networks of the cell-metabolism for simple organisms reflects an ubiquitous randomness. This implies that natural selection has exerted no or very little pressure on the network degree…

Biological Physics · Physics 2008-03-05 Petter Minnhagen , Sebastian Bernhardsson

We consider distributed networks, such as peer-to-peer networks, whose structure can be manipulated by adjusting the rules by which vertices enter and leave the network. We focus in particular on degree distributions and show that, with…

Physics and Society · Physics 2007-10-18 Gourab Ghoshal , M. E. J. Newman

This paper presents an approach to the modeling of degree-degree correlation in complex networks. Thus, a simple function, \Delta(k', k), describing specific degree-to- degree correlations is considered. The function is well suited to…

Physics and Society · Physics 2015-06-17 Alfonso Niño , Camelia Muñoz-Caro

A network growth mechanism based on a two-step preferential rule is investigated as a model of network growth in which no global knowledge of the network is required. In the first filtering step a subset of fixed size $m$ of existing nodes…

Disordered Systems and Neural Networks · Physics 2009-11-10 Hrvoje Stefancic , Vinko Zlatic

We discuss two sampling schemes for selecting random subnets from a network: Random sampling and connectivity dependent sampling, and investigate how the degree distribution of a node in the network is affected by the two types of sampling.…

Statistical Mechanics · Physics 2009-11-11 Michael P. H. Stumpf , Carsten Wiuf

We derive a analytic evolution equation for overlap parameters including the effect of degree distribution on the transient dynamics of sequence processing neural networks. In the special case of globally coupled networks, the precisely…

Disordered Systems and Neural Networks · Physics 2008-01-31 Yong Chen , Pan Zhang , Lianchun Yu , Shengli Zhang

The linear preferential attachment hypothesis has been shown to be quite successful to explain the existence of networks with power-law degree distributions. It is then quite important to determine if this mechanism is the consequence of a…

Statistical Mechanics · Physics 2009-11-07 Alexei Vazquez

Motivation: In the last few years a growing interest in biology has been shifting towards the problem of optimal information extraction from the huge amount of data generated via large scale and high-throughput techniques. One of the most…

Quantitative Methods · Quantitative Biology 2007-05-23 M. Leone , A. Pagnani

Disease and information spread over social and information networks. Understanding the spread phenomena in networks requires paying attention not only to the degree distribution but also to the degree correlation. However, it is considered…

Physics and Society · Physics 2023-11-22 Satoru Morita

Understanding the properties of response time distributions is a long-standing problem in cognitive science. We provide a tutorial overview of several contemporary models that assume power law scaling is a plausible description of the…

Neurons and Cognition · Quantitative Biology 2015-10-15 Z. Liu , O. Pavlov Garcia , J. G. Holden , R. A. Serota

Protein structures can be studied as complex networks of interacting amino acids. We study proteins of different structural classes from the network perspective. Our results indicate that proteins, regardless of their structural class, show…

Molecular Networks · Quantitative Biology 2007-11-19 Ganesh Bagler , Somdatta Sinha