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Bacterial colonies can form a wide variety of shapes and structures based on ambient and internal conditions. To help understand the mechanisms that determine the structure of and the diversity within these colonies, various numerical…

Soft Condensed Matter · Physics 2024-12-24 Bryan Verhoef , Rutger Hermsen , Joost de Graaf

Cellular actin structures are continuously turned over while keeping similar sizes. Since they all compete for a shared pool of actin monomers, the question arises how they can coexist in these dynamic steady states. Recently, the…

Subcellular Processes · Quantitative Biology 2026-04-27 Valentin Wössner , Falko Ziebert , Ulrich S. Schwarz

We consider a discrete-time model for random interface growth which admits exact formulas and converges to the Polynuclear growth model in a particular limit. The height of the interface is initially flat and the evolution involves the…

Probability · Mathematics 2023-08-28 Will FitzGerald

In the present work, we consider the evolution of two fluids separated by a sharp interface in the presence of surface tension - like, for example, the evolution of oil bubbles in water. Our main result is a weak-strong uniqueness principle…

Analysis of PDEs · Mathematics 2020-02-26 Julian Fischer , Sebastian Hensel

The simultaneous growth of multiple microbial species is a problem of fundamental ecological interest. In media containing more than one growth-limiting substrate, multiple species can coexist. The question then arises: Can single-species…

Populations and Evolution · Quantitative Biology 2007-05-23 Atul Narang , Sergei S. Pilyugin

Mathematical models come in many forms across biological applications. In the case of complex, spatial dynamics and pattern formation, stochastic models also face two main challenges: pattern data is largely qualitative, and model…

Cell Behavior · Quantitative Biology 2022-12-26 Electa Cleveland , Angela Zhu , Bjorn Sandstede , Alexandria Volkening

Ecological models traditionally explain stability and coexistence through pairwise interactions among species. These interactions can also involve groups of three or more species, higher-order interactions, which recent theory suggests can…

Populations and Evolution · Quantitative Biology 2025-10-07 Marc Duran-Sala , Sandro Meloni , Violeta Calleja-Solanas

Collective dynamics can be observed among many animal species, and have given rise in the last decades to an active and interdisciplinary field of study. Such behaviors are often modeled by active matter, in which each individual is…

Mathematical Physics · Physics 2021-08-31 Clément Erignoux

I examine the effect of exogenous spatial heterogeneity on the coexistence of competing species using a simple model of non-hierarchical competition for site occupancy on a lattice. The sites on the lattice are divided into two types…

Populations and Evolution · Quantitative Biology 2011-10-17 Ilmari Karonen

The presence of one or more species at some spatial locations but not others is a central matter in ecology. This phenomenon is related to ecological pattern formation. Nonlocal interactions can be considered as one of the mechanisms…

Populations and Evolution · Quantitative Biology 2017-12-29 Ozgur Aydogmus

We propose a type-dependent branching model with mutation and competition for modeling phylogenies of a virus population. The competition kernel depends for any two virus particles on the particles' types, the total mass of the population…

Probability · Mathematics 2017-05-10 Sandra Kliem , Anita Winter

We present a theoretical study for the intermediate stages of the growth of membranes and vesicles in supersaturated solutions of amphiphilic molecules. The problem presents important differences with the growth of droplets in the classical…

Condensed Matter · Physics 2009-10-28 A. M. Somoza , U. Marini Bettolo Marconi , P. Tarazona

Cooperation is ubiquitous in biological and social systems. Previous studies revealed that a preference toward similar appearance promotes cooperation, a phenomenon called tag-mediated cooperation or communitarian cooperation. This effect…

Populations and Evolution · Quantitative Biology 2017-04-06 Genki Ichinose , Masaya Saito , Hiroki Sayama , Hugues Bersini

Microbial populations generally evolve in volatile environments, under conditions fluctuating between harsh and mild, e.g. as the result of sudden changes in toxin concentration or nutrient abundance. Environmental variability thus shapes…

Populations and Evolution · Quantitative Biology 2023-12-07 Matthew Asker , Lluís Hernández-Navarro , Alastair M. Rucklidge , Mauro Mobilia

What determines whether an organism or collective will survive under particular conditions? This question is asked across the life sciences when determining adaptive fit, developing efficacious treatments for diseases, and assessing the…

Quantitative Methods · Quantitative Biology 2026-05-19 Connor McShaffrey , Randall D. Beer

We consider the dynamics of a virus spreading through a population that produces a mutant strain with the ability to infect individuals that were infected with the established strain. Temporary cross-immunity is included using a time delay,…

Populations and Evolution · Quantitative Biology 2023-02-16 Bruce Pell , Samantha Brozak , Tin Phan , Fuqing Wu , Yang Kuang

Model reduction is a central topic in systems biology and dynamical systems theory, for reducing the complexity of detailed models, finding important parameters, and developing multi-scale models for instance. While perturbation theory is a…

Molecular Networks · Quantitative Biology 2014-01-27 Sylvain Soliman , Francois Fages , Ovidiu Radulescu

We study the mathematical theory of second order systems with two species, arising in the dynamics of interacting particles subject to linear damping, to nonlocal forces and to external ones, and resulting into a nonlocal version of the…

Analysis of PDEs · Mathematics 2022-10-13 Marco Di Francesco , Simone Fagioli , Valeria Iorio

Many natural ecosystems harbor large numbers of coexisting species competing for far fewer distinct resources, in apparent defiance of the competitive exclusion principle. Various mechanisms have been proposed to explain this apparent…

Populations and Evolution · Quantitative Biology 2026-03-24 Leonardo Aguirre , José A. Capitán , David Alonso

Empirical observations in marine ecosystems have suggested a balance of biological and advection time scales as a possible explanation of species coexistence. To characterise this scenario, we measure the time to fixation in neutrally…

Populations and Evolution · Quantitative Biology 2018-04-09 Tobias Galla , Vicente Pérez-Muñuzuri