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Spatial extent is a complicating factor in mathematical biology. The possibility that an action at point A cannot immediately affect what happens at point B creates the opportunity for spatial nonuniformity. This nonuniformity must change…

Cellular Automata and Lattice Gases · Physics 2014-01-03 Blake C. Stacey , Andreas Gros , Yaneer Bar-Yam

Conservation science depends on an accurate understanding of what's happening in a given ecosystem. How many species live there? What is the makeup of the population? How is that changing over time? Species Distribution Modeling (SDM) seeks…

Machine Learning · Computer Science 2021-07-23 Sara Beery , Elijah Cole , Joseph Parker , Pietro Perona , Kevin Winner

Environmental changes play a critical role in determining the evolution of social dilemmas in many natural or social systems. Generally, the environmental changes include two prominent aspects: the global time-dependent fluctuations and the…

Physics and Society · Physics 2022-12-14 Yishen Jiang , Xin Wang , Longzhao Liu , Ming Wei , Jingwu Zhao , Zhiming Zheng , Shaoting Tang

A mathematical model of interacting species filling ecological niches left by the extinction of others is introduced. Species organize themselves into genera of all sizes. The size of a genus on average grows linearly with its age,…

Condensed Matter · Physics 2008-02-03 Susanna Manrubia , Maya Paczuski

A primary motivation for our research in Digital Ecosystems is the desire to exploit the self-organising properties of biological ecosystems. Ecosystems are thought to be robust, scalable architectures that can automatically solve complex,…

Neural and Evolutionary Computing · Computer Science 2016-11-18 G. Briscoe , S. Sadedin , G. Paperin

This chapter is an overview of foundational results in the mathematical theory of replicator systems. Its primary aim is to provide a unified framework for the mathematical formalisation of evolutionary processes in the spirit of…

Populations and Evolution · Quantitative Biology 2026-04-08 A. S. Bratus , S. Drozhzhin , T. Yakushkina

There is a perception that climate science can only be approached with complex computer simulations. But working climate scientists often use simple models to understand their simulations and make order-of-magnitude estimates. This article…

Atmospheric and Oceanic Physics · Physics 2018-02-23 Nadir Jeevanjee

Macroevolution is considered as a problem of stochastic dynamics in a system with many competing agents. Evolutionary events (speciations and extinctions) are triggered by fitness records found by random exploration of the agents' fitness…

adap-org · Physics 2017-01-11 Paolo Sibani , Michael Brandt , Preben Alstroem

A number of authors have in recent years proposed that the processes of macroevolution may give rise to self-organized critical phenomena which could have a significant effect on the dynamics of ecosystems. In particular it has been…

adap-org · Physics 2008-02-03 M. E. J. Newman

Many complex adaptive systems contain a large diversity of specialized components. The specialization at the level of the microscopic degrees of freedom, and diversity at the level of the system as a whole are phenomena that appear during…

adap-org · Physics 2007-05-23 Vivek S. Borkar , Sanjay Jain , Govindan Rangarajan

Joint species distribution models are popular in ecology for modeling covariate effects on species occurrence, while characterizing cross-species dependence. Data consist of multivariate binary indicators of the occurrences of different…

Methodology · Statistics 2025-07-08 Federica Stolf , David B. Dunson

We present new theoretical and empirical results on the probability distributions of species persistence times in natural ecosystems. Persistence times, defined as the timespans occurring between species' colonization and local extinction…

Populations and Evolution · Quantitative Biology 2012-03-21 S. Suweis , E. Bertuzzo , L. Mari , I. Rodriguez-Iturbe , A. Maritan , A. Rinaldo

Modeling environmental ecosystems is essential for effective resource management, sustainable development, and understanding complex ecological processes. However, traditional data-driven methods face challenges in capturing inherently…

Machine Learning · Computer Science 2025-04-08 Runlong Yu , Shengyu Chen , Yiqun Xie , Huaxiu Yao , Jared Willard , Xiaowei Jia

Experimental evolution has yielded surprising insights into human history and evolution by shedding light on the roles of chance and contingency in history and evolution, and on the deep evolutionary roots of cooperation, conflict and kin…

Populations and Evolution · Quantitative Biology 2018-10-02 Rohan Maddamsetti , Jacob Bower-Bir

In a complex community, species continuously adapt to each other. On rare occasions, the adaptation of a species can lead to the extinction of others, and even its own. "Adaptive dynamics" is the standard mathematical framework to describe…

Populations and Evolution · Quantitative Biology 2021-07-13 Vu AT Nguyen , Dervis C Vural

This paper demonstrates that simple yet important characteristics of coevolution can occur in evolutionary algorithms when only a few conditions are met. We find that interaction-based fitness measurements such as fitness (linear) ranking…

Neural and Evolutionary Computing · Computer Science 2009-07-03 James M Whitacre

This article develops a new mathematical method for holistic analysis of nonlinear dynamic compartmental systems through the system decomposition theory. The method is based on the novel dynamic system and subsystem partitioning…

Systems and Control · Electrical Eng. & Systems 2020-11-24 Huseyin Coskun

In general Evolutionary Computation (EC) includes a number of optimization methods inspired by biological mechanisms of evolution. The methods catalogued in this area use the Darwinian principles of life evolution to produce algorithms that…

Artificial Intelligence · Computer Science 2012-04-11 José A. García Gutiérrez , Carlos Cotta , Antonio J. Fernández-Leiva

In abstract terms, ecosystem ecology is about determining when two ecosystems, superficially different, are alike in some deeper way. An external observer can choose any ecosystem property as being important. In contrast, two ecosystems are…

Populations and Evolution · Quantitative Biology 2017-07-12 Matthew Spencer

Mathematical modelling of the evolution of the size-spectrum dynamics in aquatic ecosystems was discovered to be a powerful tool to have a deeper insight into impacts of human- and environmental driven changes on the marine ecosystem. In…

Analysis of PDEs · Mathematics 2024-01-02 Laura Kanzler , Benoit Perthame , Benoit Sarels
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