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Even under constant external conditions, the expression levels of genes fluctuate. Much emphasis has been placed on the components of this noise that are due to randomness in transcription and translation; here we analyze the role of noise…

Molecular Networks · Quantitative Biology 2013-08-01 Gasper Tkacik , Thomas Gregor , William Bialek

The transient behavior of an ecosystem with N random interacting species in the presence of a multiplicative noise is analyzed. The multiplicative noise mimics the interaction with the environment. We investigate different asymptotic…

Statistical Mechanics · Physics 2009-11-10 B. Spagnolo , D. Valenti , A. Fiasconaro

Self-organization through noisy interactions is ubiquitous across physics, mathematics, and machine learning, yet how long-range structure emerges from local noisy dynamics remains poorly understood. Here, we investigate three paradigmatic…

Soft Condensed Matter · Physics 2026-03-31 Satyam Anand , Guanming Zhang , Stefano Martiniani

Nucleation rate computations are of broad importance in particle physics and cosmology. Perturbative calculations are often used to compute the nucleation rate $\Gamma$, but these are incomplete. We perform nonperturbative lattice…

High Energy Physics - Theory · Physics 2025-10-02 Oliver Gould , Anna Kormu , David J. Weir

The quasi-coherent effects in two-dimensional incompressible turbulence are analyzed starting from the test particle trajectories. They can acquire coherent aspects when the stochastic potential has slow time variation and the motion is not…

Plasma Physics · Physics 2017-04-05 M. Vlad , F. Spineanu

Spatial pattern formation in excitable fluctuating media was researched analytically from the point of view of the order parameters concept. The reaction-diffusion system in external noise is considered as a model of such medium. Stochastic…

Pattern Formation and Solitons · Physics 2017-03-16 Svetlana E. Kurushina , Valery V. Maximov , Yuri M. Romanovskii

In astrophysics, turbulent diffusion is often used in place of microphysical diffusion to avoid resolving the small scales. However, we expect this approach to break down when time and length scales of the turbulence become comparable with…

Solar and Stellar Astrophysics · Physics 2014-09-05 M. S. Väisälä , A. Brandenburg , Dhrubaditya Mitra , P. J. Käpylä , M. J. Mantere

The decaying speed of sound can lead to the emergence of the primordial density perturbation in any expanding phase, even if the expansion is decelerated. Recently, some proposals have been given to implement this mechanism, in which it was…

General Relativity and Quantum Cosmology · Physics 2009-11-06 Yun-Song Piao

When a collection of phenotypically diverse organisms compete with each other for limited resources, with competition being strongest amongst the most similar, the population can evolve into tightly localised clusters. This process can be…

Populations and Evolution · Quantitative Biology 2012-05-16 Tim Rogers , Alan J. McKane , Axel G. Rossberg

Opinion dynamics models have an enormous potential for studying current phenomena such as vaccine hesitancy. Unfortunately, to date, most of the models have little to no empirical validation. One major problem in testing these models…

Physics and Society · Physics 2021-06-09 Dino Carpentras , Michael Quayle

We analyse the effect of decoherence and noise on quantum Fourier transform interferometry, in which a boson sampling photonic network is used to measure optical phase gradients. This novel type of metrology is shown to be robust against…

Quantum Physics · Physics 2019-01-15 Bogdan Opanchuk , Laura Rosales-Zárate , Margaret D. Reid , Peter D. Drummond

Often the question arises whether $Y$ can be predicted based on $X$ using a certain model. Especially for highly flexible models such as neural networks one may ask whether a seemingly good prediction is actually better than fitting pure…

Methodology · Statistics 2024-04-30 Michał Ciszewski , Jakob Söhl , Ton Leenen , Bart van Trigt , Geurt Jongbloed

We study the impact of gravitational waves originating from a first order phase transition on structure formation. To do so, we perform a second order perturbation analysis in the $1+3$ covariant framework and derive a wave equation in…

General Relativity and Quantum Cosmology · Physics 2022-04-20 Christian Döring , Salvador Centelles Chuliá , Manfred Lindner , Bjoern Malte Schaefer , Matthias Bartelmann

We study stochastic policy gradient methods from the perspective of control-theoretic limitations. Our main result is that ill-conditioned linear systems in the sense of Doyle inevitably lead to noisy gradient estimates. We also give an…

Optimization and Control · Mathematics 2022-06-15 Ingvar Ziemann , Anastasios Tsiamis , Henrik Sandberg , Nikolai Matni

We have studied the entropy-driven mechanism leading to stationary patterns formation in stochastic systems with local dynamics and non-Fickian diffusion. We have shown that a multiplicative noise fulfilling a fluctuation-dissipation…

Statistical Mechanics · Physics 2008-06-20 D. O. Kharchenko , S. V. Kokhan , A. V. Dvornichenko

Our investigation is specially motivated by the stochastic version of a common model of potential spread in a dendritic tree. We do not assume the noise in the junction points to be Markovian. In fact, we allow for long-range dependence in…

Probability · Mathematics 2018-12-21 Stefano Bonaccorsi , Delio Mugnolo

Within the nonparametric diffusion model, we develop a multiple test to infer about similarity of an unknown drift $b$ to some reference drift $b_0$: At prescribed significance, we simultaneously identify those regions where violation from…

Statistics Theory · Mathematics 2024-04-17 Johannes Brutsche , Angelika Rohde

Rhythmic and sequential segmentation of the embryonic body plan is a vital developmental patterning process in all vertebrate species. However, a theoretical framework capturing the emergence of dynamic patterns of gene expression from the…

Biological Physics · Physics 2016-10-12 David J. Jörg , Andrew C. Oates , Frank Jülicher

We consider the simulation of interacting high-dimensional systems using pairwise interacting qubits. The main tool in this context is the generation of effective many-body interactions, and we examine a number of different protocols for…

Quantum Physics · Physics 2010-03-04 Wolfgang Dür , Michael J. Bremner , Hans J. Briegel

We investigate the stimulus-dependent tuning properties of a noisy ionic conductance model for intrinsic subthreshold oscillations in membrane potential and associated spike generation. On depolarization by an applied current, the model…

Neurons and Cognition · Quantitative Biology 2009-11-11 Martin Tobias Huber And Hans Albert Braun
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