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The evolution of the Internet has manifested itself in many ways: the traffic characteristics, the interconnection topologies and the business relationships among the autonomous components. It is important to understand why (and how) this…

Networking and Internet Architecture · Computer Science 2012-11-27 Richard T. B. Ma , John C. S. Lui , Vishal Misra

Metabolic networks consist of linked functional components, or modules. The mechanism underlying metabolic network modularity is of great interest not only to researchers of basic science but also to those in fields of engineering. Previous…

Molecular Networks · Quantitative Biology 2012-09-14 Kazuhiro Takemoto

We investigate the long-term web structure emerging in evolutionary food web models when different types of functional responses are used. We find that large and complex webs with several trophic layers arise only if the population dynamics…

Populations and Evolution · Quantitative Biology 2007-05-23 Barbara Drossel , Alan McKane , Christopher Quince

Living species, ranging from bacteria to animals, exist in environmental conditions that exhibit spatial and temporal heterogeneity which requires them to adapt. Risk-spreading through spontaneous phenotypic variations is a known concept in…

Populations and Evolution · Quantitative Biology 2020-04-03 Aleksandra Ardaševa , Robert A. Gatenby , Alexander R. A. Anderson , Helen M. Byrne , Philip K. Maini , Tommaso Lorenzi

We investigate the emergence and persistence of communities through a recently proposed mechanism of adaptive rewiring in coevolutionary networks. We characterize the topological structures arising in a coevolutionary network subject to an…

Physics and Society · Physics 2015-06-22 J. C. González-Avella , M. G. Cosenza , J. L. Herrera , K. Tucci

Ecological modelling of increasingly more complex microbial populations is necessary to reflect the highly functional and diverse behaviour inherent to many systems found in reality. Anaerobic digestion is one such process that has…

Dynamical Systems · Mathematics 2015-08-24 Tewfik Sari , Matthew J. Wade

Ecological networks exhibit non-random structural patterns, such as modularity and nestedness, which indicate ecosystem stability, species diversity, and connectance. Such structure-stability relationships are well known. However, another…

Populations and Evolution · Quantitative Biology 2014-06-12 Kazuhiro Takemoto , Saori Kanamaru , Wenfeng Feng

From biosystem to complex system,the study of life is always an important area. Inspired by hyper-cycle theory about the evolution of non-life system, we study the metabolism, self-replication and mutation behavior in the Internet based on…

Networking and Internet Architecture · Computer Science 2016-11-07 Jinfa Wang , Hai Zhao , Xiao Liu

In the last three decades, researchers have tried to establish universal patterns about the structure of food webs. Recently was proposed that the exponent $\eta$ characterizing the efficiency of the energy transportation of the food web…

Statistical Mechanics · Physics 2007-05-23 L. A. Barbosa , A. Castro e Silva , J. Kamphorst Leal da Silva

Ecological systems are emergent features of ecological and adaptive dynamics of a community of interacting species. By natural selection through the abiotic environment and by co-adaptation within the community, species evolve, thereby…

Populations and Evolution · Quantitative Biology 2018-07-03 Katharina Brinck , Henrik Jeldtoft Jensen

Food webs are complex ecological networks whose structure is both ecologically and statistically constrained, with many network properties being correlated with each other. Despite the recognition of these invariable relationships in food…

Quantitative Methods · Quantitative Biology 2023-01-18 Francis Banville , Dominique Gravel , Timothée Poisot

The role of species interactions in controlling the interplay between the stability of an ecosystem and its biodiversity is still not well understood. The ability of ecological communities to recover after a small perturbation of the…

Populations and Evolution · Quantitative Biology 2016-06-15 Jacopo Grilli , Matteo Adorisio , Samir Suweis , György Barabás , Jayanth R. Banavar , Stefano Allesina , Amos Maritan

We review the recent fast progress in statistical physics of evolving networks. Interest has focused mainly on the structural properties of random complex networks in communications, biology, social sciences and economics. A number of giant…

Statistical Mechanics · Physics 2015-06-24 S. N. Dorogovtsev , J. F. F. Mendes

Food-web perturbations stemming from climate change, overexploitation, invasive species, and habitat degradation often cause an initial loss of species that results in a cascade of secondary extinctions, posing considerable challenges to…

Populations and Evolution · Quantitative Biology 2011-03-10 Sagar Sahasrabudhe , Adilson E. Motter

The interaction between natural selection and random mutation is frequently debated in recent years. Does similar dilemma also exist in the evolution of real networks such as biological networks? In this paper, we try to discuss this issue…

Statistical Mechanics · Physics 2009-01-07 Zhen Shao , Hai-jun Zhou

An important feature of many complex systems, both natural and artificial, is the structure and organization of their interaction networks with interesting properties. Here we present a theory of self-organization by evolutionary adaptation…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Venkat Venkatasubramanian , Santhoji Katare , Priyan R. Patkar , Fangping Mu

A detailed analysis of three species-rich ecosystem food webs has shown that they display scale-free distributions of connections. Such graphs of interaction are in fact shared by a number of biological and technological networks, which…

Disordered Systems and Neural Networks · Physics 2007-05-23 Ricard V. Sole Jose M. Montoya

A spatial three level food web model with a closed nutrient cycle is presented and analyzed via Monte Carlo simulations. The time evolution of the model reveals two asymptotic states: an absorbing one with all species being extinct, and a…

Populations and Evolution · Quantitative Biology 2015-06-12 Janusz Szwabiński

In this paper we present a model for the growth and evolution of Internet providers. The model reproduces the data observed for the Internet connection as probed by tracing routes from different computers. This problem represents a…

Disordered Systems and Neural Networks · Physics 2009-11-07 A. Capocci , G. Caldarelli , R. Marchetti , L. Pietronero

The analysis of some species-rich, well-defined food webs shows that they display the so called Small World behavior shared by a number of disparate complex systems. The three systems analysed (Ythan estuary web, Silwood web and the Little…

Disordered Systems and Neural Networks · Physics 2007-05-23 Jose M. Montoya Ricard V. Sole
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