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Related papers: Probabilistic pairwise sequence alignment

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We present a supervised neural network model for polyphonic piano music transcription. The architecture of the proposed model is analogous to speech recognition systems and comprises an acoustic model and a music language model. The…

Machine Learning · Statistics 2016-02-12 Siddharth Sigtia , Emmanouil Benetos , Simon Dixon

Musculoskeletal humanoids are robots that closely mimic the human musculoskeletal system, offering various advantages such as variable stiffness control, redundancy, and flexibility. However, their body structure is complex, and muscle…

Robotics · Computer Science 2025-07-08 Kento Kawaharazuka , Takahiro Hattori , Keita Yoneda , Kei Okada

Image-based sequencing of mRNA makes it possible to see where in a tissue sample a given gene is active, and thus discern large numbers of different cell types in parallel. This is crucial for gaining a better understanding of tissue…

Quantitative Methods · Quantitative Biology 2018-02-27 Gabriele Partel , Giorgia Milli , Carolina Wählby

Breast cancer is a relatively common cancer among gynecological cancers. Its diagnosis often relies on the pathology of cells in the lesion. The pathological diagnosis of breast cancer not only requires professionals and time, but also…

Image and Video Processing · Electrical Eng. & Systems 2024-04-15 MingXuan Xiao , Yufeng Li , Xu Yan , Min Gao , Weimin Wang

We present Manifold Alignment Determination (MAD), an algorithm for learning alignments between data points from multiple views or modalities. The approach is capable of learning correspondences between views as well as correspondences…

Machine Learning · Statistics 2017-01-13 Andreas Damianou , Neil D. Lawrence , Carl Henrik Ek

Pose prediction is to predict future poses given a window of previous poses. In this paper, we propose a new problem that predicts poses using 3D joint coordinate sequences. Different from the traditional pose prediction based on Mocap…

Computer Vision and Pattern Recognition · Computer Science 2019-09-05 Xiaoli Liu , Jianqin Yin , Huaping Liu , Yilong Yin

In this paper we address the problem of establishing correspondences between different instances of the same object. The problem is posed as finding the geometric transformation that aligns a given image pair. We use a convolutional neural…

Computer Vision and Pattern Recognition · Computer Science 2019-01-25 Zakaria Laskar , Hamed R. Tavakoli , Juho Kannala

Evolutionary artificial neural networks (EANNs) refer to a special class of artificial neural networks (ANNs) in which evolution is another fundamental form of adaptation in addition to learning. Evolutionary algorithms are used to adapt…

Artificial Intelligence · Computer Science 2016-11-17 Ajith Abraham

Given a set of sequences, the distance between pairs of them helps us to find their similarity and derive structural relationship amongst them. For genomic sequences such measures make it possible to construct the evolution tree of…

Information Theory · Computer Science 2012-08-29 Sandeep Hosangadi

Predicting trajectories of pedestrians is quintessential for autonomous robots which share the same environment with humans. In order to effectively and safely interact with humans, trajectory prediction needs to be both precise and…

Computer Vision and Pattern Recognition · Computer Science 2018-11-27 Nishant Nikhil , Brendan Tran Morris

Attentive Neural Process (ANP) improves the fitting ability of Neural Process (NP) and improves its prediction accuracy, but the higher time complexity of the model imposes a limitation on the length of the input sequence. Inspired by…

Computer Vision and Pattern Recognition · Computer Science 2022-02-07 Xiaohan Yu , Shaochen Mao

Animals perform near-optimal probabilistic inference in a wide range of psychophysical tasks. Probabilistic inference requires trial-to-trial representation of the uncertainties associated with task variables and subsequent use of this…

Neurons and Cognition · Quantitative Biology 2017-04-25 A. Emin Orhan , Wei Ji Ma

We propose a simple tractable pair hidden Markov model for pairwise sequence alignment that accounts for the presence of short tandem repeats. Using the framework of gain functions, we design several optimization criteria for decoding this…

Quantitative Methods · Quantitative Biology 2013-07-31 Michal Nánási , Tomáš Vinař , Broňa Brejová

Affordable, high-quality whole-genome assemblies have made it possible to construct rich pangenomes that capture haplotype diversity across many species. As these datasets grow, they motivate the development of specialized techniques…

Genomics · Quantitative Biology 2025-12-19 Gorkem Kadir Solun , Ugur Dogrusoz

Both parametric and non-parametric approaches have demonstrated encouraging performances in the human parsing task, namely segmenting a human image into several semantic regions (e.g., hat, bag, left arm, face). In this work, we aim to…

Computer Vision and Pattern Recognition · Computer Science 2015-04-07 Si Liu , Xiaodan Liang , Luoqi Liu , Xiaohui Shen , Jianchao Yang , Changsheng Xu , Liang Lin , Xiaochun Cao , Shuicheng Yan

Image or object recognition is an important task in computer vision. With the hight-speed processing power on modern platforms and the availability of mobile phones everywhere, millions of photos are uploaded to the internet per minute, it…

Computer Vision and Pattern Recognition · Computer Science 2017-06-06 Yong Khoo , Seo-hyeon Keun

Despite advances in feature representation, leveraging geometric relations is crucial for establishing reliable visual correspondences under large variations of images. In this work we introduce a Hough transform perspective on…

Computer Vision and Pattern Recognition · Computer Science 2021-04-01 Juhong Min , Minsu Cho

We present a sequence-based probabilistic formalism that directly addresses co-operative effects in networks of interacting positions in proteins, providing significantly improved contact prediction, as well as accurate quantitative…

Quantitative Methods · Quantitative Biology 2012-07-12 Alan Lapedes , Bertrand Giraud , Christopher Jarzynski

This paper presents a novel concept to support physically impaired humans in daily object manipulation tasks with a robot. Given a user's manipulation sequence, we propose a predictive model that uniquely casts the user's sequential…

Robotics · Computer Science 2023-09-11 Theodoros Stouraitis , Michael Gienger

Data-driven approaches for modeling human skeletal motion have found various applications in interactive media and social robotics. Challenges remain in these fields for generating high-fidelity samples and robustly reconstructing motion…

Computer Vision and Pattern Recognition · Computer Science 2021-04-08 Wenjie Yin , Hang Yin , Danica Kragic , Mårten Björkman