Related papers: The Shift-Match Number and String Matching Probabi…

A shuffle of two strings is formed by interleaving the characters into a new string, keeping the characters of each string in order. A string is a square if it is a shuffle of two identical strings. There is a known polynomial time dynamic…

The discrete distribution of the length of longest increasing subsequences in random permutations of $n$ integers is deeply related to random matrix theory. In a seminal work, Baik, Deift and Johansson provided an asymptotics in terms of…

We study the design of efficient algorithms for combinatorial pattern matching. More concretely, we study algorithms for tree matching, string matching, and string matching in compressed texts.

Let $\Sigma$ be an alphabet. For two strings $X$, $Y$, and a constrained string $P$ over the alphabet $\Sigma$, the constrained longest common subsequence and substring problem for two strings $X$ and $Y$ with respect to $P$ is to find a…

We say a string has a cadence if a certain character is repeated at regular intervals, possibly with intervening occurrences of that character. We call the cadence anchored if the first interval must be the same length as the others. We…

We introduce a new permutation statistic, namely, the number of cycles of length $q$ consisting of consecutive integers, and consider the distribution of this statistic among the permutations of $\{1,2,...,n\}$. We determine explicit…

We developed an algorithm that easily goes from one odd number to the next odd number in binary representation for the reduced forward Collatz map (Syracuse function). The algorithm indicates when an odd number can grow or shrink to the…

We introduce a new class of problems lying halfway between questions about graph capacity and intersection. We say that two binary sequences x and y of the same length have a skewincidence if there is a coordinate i for which x_i=y_{i+1}=1…

The paper presents a language model that develops syntactic structure and uses it to extract meaningful information from the word history, thus enabling the use of long distance dependencies. The model assigns probability to every joint…

In the deletion channel, an important problem is to determine the number of subsequences derived from a string $U$ of length $n$ when subjected to $t$ deletions. It is well-known that the number of subsequences in the setting exhibits a…

In a \emph{weighted sequence}, for every position of the sequence and every letter of the alphabet a probability of occurrence of this letter at this position is specified. Weighted sequences are commonly used to represent imprecise or…

Consider n unit intervals, say [1,2], [3,4], ..., [2n-1,2n]. Identify their endpoints in pairs at random, with all (2n-1)!! = (2n-1) (2n-3) ... 3 1 pairings being equally likely. The result is a collection of cycles of various lengths, and…

A pairing function for the non-negative integers is said to be binary perfect if the binary representation of the output is of length 2k or less whenever each input has length k or less. Pairing functions with square shells, such as the…

Consider the following Markov chain on permutations of length $n$. At each time step we choose a random position. If the letter at that position is smaller than the letter immediately to the left (cyclically) then these letters swap…

Described are two algorithms to find long approximate palindromes in a string, for example a DNA sequence. A simple algorithm requires O(n)-space and almost always runs in $O(k.n)$-time where n is the length of the string and k is the…

By an analogy to the duality between the recurrence time and the longest match length, we introduce a quantity dual to the maximal repetition length, which we call the repetition time. Extending prior results, we sandwich the repetition…

We introduce a new algorithm for constructing the generalized suffix array of a collection of highly similar strings. As a first step, we construct a compressed representation of the matching statistics of the collection with respect to a…

Given any two sequences of complex numbers, we establish simple relations between their binomial convolution and the binomial convolution of their individual binomial transforms. We employ these relations to derive new identities involving…

String complexity is defined as the cardinality of a set of all distinct words (factors) of a given string. For two strings, we introduce the joint string complexity as the cardinality of a set of words that are common to both strings.…

Important papers have appeared recently on the problem of indexing binary strings for jumbled pattern matching, and further lowering the time bounds in terms of the input size would now be a breakthrough with broad implications. We can…