Related papers: Enzyme as a thermal resonance pump
Small amplitude oscillations are a commonly observed feature in prominences/filaments. These oscillations appear to be of local nature, are associated to the fine structure of prominence plasmas, and simultaneous flows and counterflows are…
We study the production and the observability of Lambda*(1520), K*0(892), and Sigma*(1385), strange hadron resonances as function of the freeze-out conditions within the statistical model of hadron production. We obtain an estimate of how…
We simulate dynamics of many-particle systems of bosons and fermions using discrete time quantum walks on lattices. We present a computational proof of a behavior of the simulated systems similar to the one observed in Hamiltonian dynamics…
The relaxation processes in an ultra-cold degenerate atomic Fermi gas near a Feshbach resonance are considered. It is shown that the relaxation rate of the molecules being in a resonance with the atomic Fermi system is of the order of the…
We design toy protein mimicking a machine-like function of an enzyme. Using an insight gained by the study of conformation space of compact lattice polymers, we demonstrate the possibility of a large scale conformational rearrangement which…
Local master equations are a widespread tool to model open quantum systems, especially in the context of many-body systems. These equations, however, are believed to lead to thermodynamic anomalies and violation of the laws of…
We consider the time development of the density matrix for a system coupled to a thermal bath, in models that go beyond the standard two-level systems through addition of an energy excitation degree of freedom and through the possibility of…
We investigate the time evolution process of one selected (initially prepared by optical pumping) vibrational molecular state, coupled to all other intra-molecular vibrational states of the same molecule, and also to its environment.…
Proteinoids -- thermal proteins -- are produced by heating amino acids to their melting point and initiation of polymerisation to produce polymeric chains. Proteinoids swell in aqueous solution into hollow microspheres. The proteinoid…
Active phenomena which involve force generation and motion play a key role in a number of phenomena in living cells such as cell motility, muscle contraction and the active transport of material and organelles. Here we discuss mechanical…
Quantum mechanical phenomena, such as electronic coherence and entanglement, play a key role in achieving the unrivalled efficiencies of light-energy conversion in natural photosynthetic light-harvesting complexes, and triggered the growing…
The free energy of a quantum oscillator in an arbitrary heat bath at a temperature T is given by a "remarkable formula" which involves only a single integral. This leads to a corresponding simple result for the entropy. The low temperature…
We report a special phenomenon: trailing waves. They are generated by the propagation of elastic waves in plates at large frequency-thickness (fd) product. Unlike lamb waves and bulk waves, trailing waves are a list of non-dispersive pulses…
An accurate approach to calculate the optical response of periodic structures is proposed. Using the genuine superlattice eigenfunctions and energy eigenvalues, the eigenfunctions parity symmetries, the subband symmetries and the detached…
We carry out a theoretical study of the vibrational and relaxation properties of naturally-occurring proteins with the purpose of characterizing both the folding and equilibrium thermodynamics. By means of a suitable model we provide a full…
In genomic applications, there is often interest in identifying genes whose time-course expression trajectories exhibit periodic oscillations with a period of approximately 24 hours. Such genes are usually referred to as circadian, and…
Rhythmic and sequential segmentation of the embryonic body plan is a vital developmental patterning process in all vertebrate species. However, a theoretical framework capturing the emergence of dynamic patterns of gene expression from the…
We study the thermalization of excitations generated by spontaneous emission events for cold bosons in an optical lattice. Computing the dynamics described by the many-body master equation, we characterize equilibration timescales in…
We give a brief account of the development of methods to include thermal fluctuations into lattice Boltzmann algorithms. Emphasis is put on our recent work (Phys. Rev. E 76, 036704 (2007)) which provides a clear understanding in terms of…
We apply estimation theory to a system formed by two interacting trapped ions. By using the Fisher matrix formalism, we introduce a simple scheme for estimation of the temperature of the longitudinal vibrational modes of the ions. We use…