Related papers: Phase Transition in Reconstituted Chromatin
Freezing of charged colloids on square or triangular two-dimensional periodic substrates has been recently shown to realize a rich variety of orientational orders. We propose a theoretical framework to analyze the corresponding structures.…
Using a version of density-functional theory which combines Onsager approximation and fundamental-measure theory for spatially nonuniform phases, we have studied the phase diagram of freely rotating hard rectangles and hard discorectangles.…
High density phase transitions in a 4 dimensional Nambu-Jona-Lasinio model containing a single symmetry breaking order parameter coming from the fermion-antifermion condensates are researched and expounded by means of both the gap equation…
A multiscale scheme combining molecular dynamics (MD) and microscopic phase-field theory is proposed to study the structural phase transformations in solids with inhomogeneous strain field. The approach calculates strain response based on…
Transcription is a fundamental cellular process, and the first step of gene expression. In human cells, it depends on the binding to chromatin of various proteins, including RNA polymerases and numerous transcription factors (TFs).…
When the density of a nuclear system is decreased, homogeneous states undergo the so-called Mott transition towards clusterised states, e.g. alpha clustering, both in nuclei and in nuclear matter. Here we investigate such a quantum phase…
Coexisting ferromagnetic (FM) and antiferromagnetic (AFM) phases over a range of temperature (T) and magnetic field (H), have been reported in many materials. The 1st order FM-AFM transition is completed over a broad T (or H) range; this is…
Biomolecular condensates form by phase separation of biological polymers and have important functions in the cell $-$ functions that are inherently connected to their physical properties. A remarkable aspect of such condensates is that…
The eukaryotic cell nucleus harbors the DNA genome that is organized in a dynamic chromatin network and embedded in a viscous crowded fluid. This environment directly affects enzymatic reactions and target search processes that access the…
We study a quantum Bose-Fermi mixture near a broad Feshbach resonance at zero temperature. Within a quantum field theoretical model a two-step Gaussian approximation allows to capture the main features of the quantum phase diagram. We show…
We study the confining/deconfining phase transition in the mass deformed Yang-Mills matrix model which is obtained by the dimensional reduction of the bosonic sector of the four-dimensional maximally supersymmetric Yang-Mills theory…
We discuss a numerical analysis employing the density of partition function zeroes which permits effective distinction between phase transitions of first and second order, elucidates crossover between such phase transitions and gives a new…
We describe the properties of quark matter at zero temperature and finite baryon densities within microscopic Vlasov/molecular dynamics approaches. We use an inter-quark Richardson's potential consistent with the indications of Lattice QCD…
The crumpled-to-flat phase transition that occurs in D-dimensional polymerized phantom membranes embedded in a d-dimensional space is investigated nonperturbatively using a field expansion up to order eight in powers of the order parameter.…
Recent realization of Bose-Einstein condensation of light in 2D provides a new platform for studying novel phases and phase transitions. The combination of low effective mass of the confined light and the presence of the dye molecules with…
Possibility of structured mixed phases at first order phase transitions is examined with taking into account of charge screening and surface effects. Hadron-quark phase transition in dense neutron star interior is considered, as concrete…
Polymorphism is ubiquitous in crystalline solids. Amorphous solids, such as glassy water and silicon, may undergo amorphous-to-amorphous transitions (AATs). The nature of AATs remains ambiguous, due to diverse system-dependent behaviors and…
A new simple method for the first order phase transition kinetics is suggested. The metastable phase consumption can be imagined in frames of the modisperse approximation for the distribution of the droplets sizes. In all situations of the…
Non-aligning self-propelled particles with purely repulsive excluded volume interactions undergo athermal motility-induced phase separation into a dilute gas and a dense cluster phase. Here, we use enhanced sampling computational methods…
Chromatin is a highly compact and dynamic nuclear structure that consists of DNA and associated proteins. The main organizational unit is the nucleosome, which consists of a histone octamer with DNA wrapped around it. Histone proteins are…