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Experiments with myxobacterial aggregates reveal standing waves called rippling patterns. Here, these structures are modelled with a simple discrete model based on the interplay between migration and collisions of cells. Head-to-head…

Biological Physics · Physics 2009-11-07 Uwe Boerner , Andreas Deutsch , Hans Reichenbach , Markus Baer

We simulate self-reproducing micellar systems using a recently introduced lattice-gas automaton. This dynamical model correctly describes the equilibrium and non-equilibrium properties of mixtures of oil, water and surfactants. The…

Soft Condensed Matter · Physics 2008-02-03 Peter V. Coveney , Andrew N. Emerton , Bruce M. Boghosian

Rippling patterns of myxobacteria appear in starving colonies before they aggregate to form fruiting bodies. These periodic traveling cell density waves arise from the coordination of individual cell reversals, resulting from an internal…

Statistical Mechanics · Physics 2016-01-26 L. L. Bonilla , A. Glavan , A. Marquina

We introduce a novel lattice-gas cellular automaton (LGCA) for compressible vectorial active matter with polar and nematic velocity alignment. Interactions are, by construction, zero-range. For polar alignment, we show the system undergoes…

Several cellular automata (CA) models have been developed to simulate self-organization of multiple levels of structures. However, they do not obey microscopic reversibility and conservation laws. In this paper, we describe the construction…

Cellular Automata and Lattice Gases · Physics 2015-05-13 Takayuki Nozawa , Toshiyuki Kondo

We introduce the first extension of a Lattice Gas Automaton (LGA) model to accurately replicate observed emergent phenomena in granular materials with a special focus on previously unexplored jamming transitions by incorporating…

Soft Condensed Matter · Physics 2023-09-04 M. Gaber , Raquel H. Ribeiro , J. Kozicki

Reactive lattice gas automata provide a microscopic approachto the dynamics of spatially-distributed reacting systems. After introducing the subject within the wider framework of lattice gas automata (LGA) as a microscopic approach to the…

comp-gas · Physics 2009-10-28 Jean Pierre Boon , David Dab , Raymond Kapral , Anna Lawniczak

New computational tools for solid-state synthesis recipe design are needed in order to accelerate the experimental realization of novel functional materials proposed by high-throughput materials discovery workflows. This work contributes a…

Materials Science · Physics 2024-07-30 Max C. Gallant , Matthew J. McDermott , Bryant Li , Kristin A. Persson

In this paper we analyze the relaxation to steady-state of intracellular diffusion in a pair of cells with gap-junction coupling. Gap junctions are prevalent in most animal organs and tissues, providing a direct diffusion pathway for both…

Statistical Mechanics · Physics 2022-03-23 Paul C. Bressloff

This paper describes and validates for the first time the dynamic modelling of Liquid Crystal (LC)-based planar multi-resonant cells, as well as its use as bias signals synthesis tool to improve their reconfigurability time. The dynamic LC…

Both cellular automata (CA) and lattice-gas automata (LG) provide finite algorithmic presentations for certain classes of infinite dynamical systems studied by symbolic dynamics; it is customary to use the term `cellular automaton' or…

Cellular Automata and Lattice Gases · Physics 2007-09-11 Tommaso Toffoli , Silvio Capobianco , Patrizia Mentrasti

Regulation of cell proliferation is a crucial aspect of tissue development and homeostasis and plays a major role in morphogenesis, wound healing, and tumor invasion. A phenomenon of such regulation is contact inhibition, which describes…

Cell Behavior · Quantitative Biology 2024-07-01 Steffen Lange , Jannik Schmied , Paul Willam , Anja Voss-Böhme

We present a minimal driven lattice gas model which generates the morphological characteristics associated with single colony mycelium arising from the growth and branching process of fungal hyphae, which is fed by a single source of…

Statistical Mechanics · Physics 2020-03-17 Bhagyashri Shinde , Shagufta Khan , Sudipto Muhuri

We study a cellular automaton model, which allows diffusion of energy (or equivalently any other physical quantities such as mass of a particular compound) at every lattice site after each timestep. Unit amount of energy is randomly added…

Condensed Matter · Physics 2009-10-22 T. C. Chan , H. F. Chau , K. S. Cheng

Experiments show that the movement of eukaryotic cells is regulated by a process of phase separation of two competing enzymes on the cell membrane, that effectively amplifies shallow external gradients of chemical attractant. Notably, the…

Statistical Mechanics · Physics 2008-12-19 Teresa Ferraro , Antonio de Candia , Andrea Gamba , Antonio Coniglio

The experimental use of micropatterned quasi-1D substrates has emerged as an useful experimental tool to study the nature of cell-cell interactions and gain insight on collective behaviour of cell colonies. Inspired by these experiments, we…

Soft Condensed Matter · Physics 2025-07-31 Harshal Potdar , Ignacio Pagonabarraga , Sudipto Muhuri

We study two-dimensional cellular automata, each cell takes three states: resting, excited and refractory. A resting cell excites if number of excited neighbours lies in a certain interval (excitation interval). An excited cell become…

Cellular Automata and Lattice Gases · Physics 2013-02-12 Andrew Adamatzky , Leon Chua

The formation of self assembled structures such as micelles has been intensively studied and is well understood. The ability of a solution of amphiphilic molecules to develop micelles is depending on the concentration and characterized by…

Soft Condensed Matter · Physics 2019-05-13 Simon Raschke , Andreas Heuer

We use a boolean cellular automaton model to describe the diffusion limited dynamics of the irreversible reaction A+A->A+S on a 1D lattice. We derive a set of equations for the dynamics of the empty interval probabilities from which…

Statistical Mechanics · Physics 2007-05-23 E. Abad , H. L. Frisch , G. Nicolis

The well-known relaxed theoretical minimum emittance (TME) cell is commonly used in the design of multi-bend achromat (MBA) lattices for the new generation of diffraction limited storage rings. But significantly lower emittance at moderate…

Accelerator Physics · Physics 2019-02-07 B. Riemann , A. Streun
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