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Identifying the spatio-temporal network structure of brain activity from multi-neuronal data streams is one of the biggest challenges in neuroscience. Repeating patterns of precisely timed activity across a group of neurons is potentially…

Neurons and Cognition · Quantitative Biology 2009-03-03 Casey Diekman , Kohinoor Dasgupta , Vijay Nair , P. S. Sastry , K. P. Unnikrishnan

Understanding how stimuli and synaptic connectivity in uence the statistics of spike patterns in neural networks is a central question in computational neuroscience. Maximum Entropy approach has been successfully used to characterize the…

Biological Physics · Physics 2016-11-26 Rodrigo Cofre , Bruno Cessac

We consider the information transmission problem in neurons and its possible implications for learning in neural networks. Our approach is based on recent developments in statistical physics and complexity science. Combining sensory…

Neurons and Cognition · Quantitative Biology 2025-09-30 Siddharth Kackar

In this work we present a novel internal clock based space-time neural network for motion speed recognition. The developed system has a spike train encoder, a Spiking Neural Network (SNN) with internal clocking behaviors, a pattern…

Computer Vision and Pattern Recognition · Computer Science 2020-01-29 Junwen Luo , Jiaoyan Chen

Modeling place functions from a computational perspective is a prevalent research topic. Trajectory embedding, as a neural-network-backed dimension reduction technology, allows the possibility to put places with similar social functions at…

Artificial Intelligence · Computer Science 2020-12-15 Cheng Fu , Robert Weibel

Computational modeling is becoming a widely used methodology in modern neuroscience. However, as the complexity of the phenomena under study increases, the analysis of the results emerging from the simulations concomitantly becomes more…

Neurons and Cognition · Quantitative Biology 2020-03-16 Sergio E. Galindo , Pablo Toharia , Oscar D. Robles , Eduardo Ros , Luis Pastor , Jesús A. Garrido

Conventional modeling approaches have found limitations in matching the increasingly detailed neural network structures and dynamics recorded in experiments to the diverse brain functionalities. On another approach, studies have…

Neurons and Cognition · Quantitative Biology 2017-09-05 Chaofei Hong

A computational theory for classification of natural biosonar targets is developed based on the properties of an example stimulus ensemble. An extensive set of echoes (84 800) from four different foliages was transcribed into a spike code…

Biological Physics · Physics 2007-05-23 Rolf Mueller

Distances are pervasive in machine learning. They serve as similarity measures, loss functions, and learning targets; it is said that a good distance measure solves a task. When defining distances, the triangle inequality has proven to be a…

Machine Learning · Computer Science 2020-07-08 Silviu Pitis , Harris Chan , Kiarash Jamali , Jimmy Ba

Neural correlations during a cognitive task are central to study brain information processing and computation. However, they have been poorly analyzed due to the difficulty of recording simultaneous single neurons during task performance.…

Neurons and Cognition · Quantitative Biology 2016-02-17 Adrià Tauste Campo , Marina Martinez-Garcia , Verónica Nácher , Ranulfo Romo , Gustavo Deco

Branching with immigration is one of the most common models for the stochastic processes observed in neuronal circuits. However, it is not observed directly and, in order to create branching-like processes, the observed spike time series is…

Statistical Mechanics · Physics 2021-09-23 Johannes Pausch

The activity of neurons within brain circuits has been ubiquitously reported to be correlated. The impact of these correlations on brain function has been extensively investigated. Correlations can in principle increase or decrease the…

Neurons and Cognition · Quantitative Biology 2025-07-24 Miguel Ibáñez-Berganza , Giulio Bondanelli , Stefano Panzeri

Neurons encode and transmit information in spike sequences. However, despite the effort devoted to quantify their information content, little progress has been made in this regard. Here we use a nonlinear method of time-series analysis…

Neurons and Cognition · Quantitative Biology 2020-02-19 Cristian Estarellas , Maria Masoliver , Cristina Masoller , Claudio Mirasso

The Thousand Brains Theory (TBT) and its open-source Monty framework model object recognition through sensorimotor inference -- identifying objects by actively moving a sensor across their surface and building evidence contact by contact.…

Neural and Evolutionary Computing · Computer Science 2026-05-22 Joy Bose

Time series similarity measures are highly relevant in a wide range of emerging applications including training machine learning models, classification, and predictive modeling. Standard similarity measures for time series most often…

Machine Learning · Computer Science 2021-01-22 Lucas Cassiel Jacaruso

Modern applications frequently collect and analyze temporal data in the form of multivariate time series (MTS) -- time series that contain multiple channels. A common task in this context is subsequence search, which involves identifying…

Databases · Computer Science 2025-12-18 Jens E. d'Hondt , Teun Kortekaas , Odysseas Papapetrou , Themis Palpanas

Encoding the distance between locations in space is essential for accurate navigation. Grid cells, a functional class of neurons in medial entorhinal cortex, are believed to support this computation. However, existing theories of how…

Neurons and Cognition · Quantitative Biology 2025-11-12 Pritipriya Dasbehera , Akshunna S. Dogra , William T. Redman

Background: Current neuronal monitoring techniques, such as calcium imaging and multi-electrode arrays, enable recordings of spiking activity from hundreds of neurons simultaneously. Of primary importance in systems neuroscience is the…

Neurons and Cognition · Quantitative Biology 2014-11-11 Yazan N. Billeh , Michael T. Schaub , Costas A. Anastassiou , Mauricio Barahona , Christof Koch

Spiking neural networks (SNNs) are brain-inspired mathematical models with the ability to process information in the form of spikes. SNNs are expected to provide not only new machine-learning algorithms, but also energy-efficient…

Neural and Evolutionary Computing · Computer Science 2020-01-16 Yusuke Sakemi , Kai Morino , Takashi Morie , Kazuyuki Aihara

Neuroscience has recently made much progress, expanding the complexity of both neural-activity measurements and brain-computational models. However, we lack robust methods for connecting theory and experiment by evaluating our new big…

Quantitative Methods · Quantitative Biology 2023-07-06 Heiko H. Schütt , Alexander D. Kipnis , Jörn Diedrichsen , Nikolaus Kriegeskorte