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We describe a new, computationally simple method for analyzing the dynamics of neuronal spike trains driven by external stimuli. The goal of our method is to test the predictions of simple spike-generating models against extracellularly…

Neurons and Cognition · Quantitative Biology 2007-05-23 Daniel S. Reich , Jonathan D. Victor , Bruce W. Knight

Bidimensional spiking models currently gather a lot of attention for their simplicity and their ability to reproduce various spiking patterns of cortical neurons, and are particularly used for large network simulations. These models…

Numerical Analysis · Computer Science 2012-11-07 Jonathan Touboul

At the single-neuron level, precisely timed spikes can either constitute firing-rate codes or spike-pattern codes that utilize the relative timing between consecutive spikes. There has been little experimental support for the hypothesis…

Neurons and Cognition · Quantitative Biology 2009-12-18 Hugo Gabriel Eyherabide , Ariel Rokem , Andreas V. M. Herz , Ines Samengo

We propose a statistical method for modeling the non-Poisson variability of spike trains observed in a wide range of brain regions. Central to our approach is the assumption that the variance and the mean of interspike intervals are related…

Neurons and Cognition · Quantitative Biology 2015-05-22 Shinsuke Koyama

Although perceptual (dis)similarity between sensory stimuli seems akin to distance, measuring the Euclidean distance between vector representations of auditory stimuli is a poor estimator of subjective dissimilarity. In hearing, nonlinear…

Neurons and Cognition · Quantitative Biology 2020-11-03 Sarah Oh , Elijah FW Bowen , Antonio Rodriguez , Damian Sowinski , Eva Childers , Annemarie Brown , Laura Ray , Richard Granger

Although temporal coding through spike-time patterns has long been of interest in neuroscience, the specific structures that could be useful for spike-time codes remain highly unclear. Here, we introduce a new analytical approach, using…

Neurons and Cognition · Quantitative Biology 2022-11-15 Federico W. Pasini , Alexandra N. Busch , Ján Mináč , Krishnan Padmanabhan , Lyle Muller

We derive a synaptic weight update rule for learning temporally precise spike train to spike train transformations in multilayer feedforward networks of spiking neurons. The framework, aimed at seamlessly generalizing error backpropagation…

Neural and Evolutionary Computing · Computer Science 2016-01-11 Arunava Banerjee

Metric learning has the aim to improve classification accuracy by learning a distance measure which brings data points from the same class closer together and pushes data points from different classes further apart. Recent research has…

Machine Learning · Computer Science 2018-05-21 Benjamin Paaßen

Advances in neuroscience have enabled researchers to measure the activities of large numbers of neurons simultaneously in behaving animals. We have access to the fluorescence of each of the neurons which provides a first-order approximation…

Neurons and Cognition · Quantitative Biology 2023-07-21 Abhisek Chakraborty

We propose a new class of metrics on sets, vectors, and functions that can be used in various stages of data mining, including exploratory data analysis, learning, and result interpretation. These new distance functions unify and generalize…

The relative timing of action potentials in neurons recorded from local cortical networks often shows a non-trivial dependence, which is then quantified by cross-correlation functions. Theoretical models emphasize that such spike train…

Neurons and Cognition · Quantitative Biology 2017-06-28 Taskin Deniz , Stefan Rotter

The nervous system represents time-dependent signals in sequences of discrete action potentials or spikes, all spikes are identical so that information is carried only in the spike arrival times. We show how to quantify this information, in…

Condensed Matter · Physics 2008-02-03 S. P. Strong , Roland Koberle , Rob R. de Ruyter van Steveninck , William Bialek

Sensory stimuli are usually composed of different features (the what) appearing at irregular times (the when). Neural responses often use spike patterns to represent sensory information. The what is hypothesized to be encoded in the…

Neurons and Cognition · Quantitative Biology 2010-12-13 Hugo Gabriel Eyherabide , Inés Samengo

This article contains two main theoretical results on neural spike train models. The first assumes that the spike train is modeled as a counting or point process on the real line where the conditional intensity function is a product of a…

Statistics Theory · Mathematics 2007-06-13 Hock Peng Chan , Wei-Liem Loh

In this paper, we propose a metric on the space of finite sets of trajectories for assessing multi-target tracking algorithms in a mathematically sound way. The main use of the metric is to compare estimates of trajectories from different…

Computer Vision and Pattern Recognition · Computer Science 2020-09-15 Ángel F. García-Fernández , Abu Sajana Rahmathullah , Lennart Svensson

To improve our understanding of connected systems, different tools derived from statistics, signal processing, information theory and statistical physics have been developed in the last decade. Here, we will focus on the graph comparison…

Physics and Society · Physics 2018-04-23 Johann H. Martínez , Mario Chavez

The brain has no direct access to physical stimuli, but only to the spiking activity evoked in sensory organs. It is unclear how the brain can structure its representation of the world based on differences between those noisy, correlated…

Neurons and Cognition · Quantitative Biology 2018-04-16 Christophe Gardella , Olivier Marre , Thierry Mora

Encoding static images into spike trains is a fundamental step for enabling Spiking Neural Networks (SNNs) to process visual information. However, widely used methods such as rate coding, Poisson encoding, and time-to-first-spike (TTFS)…

Neural and Evolutionary Computing · Computer Science 2026-04-23 Minchi Hu

Temporal graphs are commonly used to represent time-resolved relations between entities in many natural and artificial systems. Many techniques were devised to investigate the evolution of temporal graphs by comparing their state at…

Social and Information Networks · Computer Science 2024-11-20 Lorenzo Dall'Amico , Alain Barrat , Ciro Cattuto

In many animal sensory pathways, the transformation from external stimuli to spike trains is essentially deterministic. In this context, a new mathematical framework for coding and reconstruction, based on a biologically plausible model of…

Neurons and Cognition · Quantitative Biology 2019-08-01 Anik Chattopadhyay , Arunava Banerjee