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Existing digital human models approximate the human skeletal system using rigid bodies connected by rotational joints. While the simplification is considered acceptable for legs and arms, it significantly lacks fidelity to model rich torso…

Graphics · Computer Science 2023-05-10 Seunghwan Lee , Yifeng Jiang , C. Karen Liu

The growing importance of real-time simulation in the medical field has exposed the limitations and bottlenecks inherent in the digital representation of complex biological systems. This paper presents a novel methodology aimed at advancing…

Machine Learning · Computer Science 2024-12-17 Lucas Tesán , David González , Pedro Martins , Elías Cueto

In numerical simulations of cardiac mechanics, coupling the heart to a model of the circulatory system is essential for capturing physiological cardiac behavior. A popular and efficient technique is to use an electrical circuit analogy,…

Employing simplex space-time meshes enlarges the scope of compressible flow simulations. The simultaneous discretization of space and time with simplex elements extends the flexibility of unstructured meshes from space to time. In this…

Numerical Analysis · Mathematics 2024-09-05 Max von Danwitz , Violeta Karyofylli , Norbert Hosters , Marek Behr

We provide a road towards obtaining gravitational waveforms from inspiraling material binaries with an accuracy viable for third-generation gravitational wave detectors, without necessarily advancing computational hardware or…

General Relativity and Quantum Cosmology · Physics 2021-07-07 John Ryan Westernacher-Schneider

Cardiac parametric mapping is useful for evaluating cardiac fibrosis and edema. Parametric mapping relies on single-shot heartbeat-by-heartbeat imaging, which is susceptible to intra-shot motion during the imaging window. However, reducing…

Image and Video Processing · Electrical Eng. & Systems 2025-03-25 Calder D. Sheagren , Brenden T. Kadota , Jaykumar H. Patel , Mark Chiew , Graham A. Wright

Cardiac magnetic resonance imaging (MRI) requires reconstructing a real-time video of a beating heart from continuous highly under-sampled measurements. This task is challenging since the object to be reconstructed (the heart) is…

Image and Video Processing · Electrical Eng. & Systems 2024-01-12 Johannes F. Kunz , Stefan Ruschke , Reinhard Heckel

Engineered heart tissues (EHTs) present a potential solution to some of the current challenges in the treatment of heart disease; however, the development of mature, adult-like cardiac tissues remains elusive. Mechanical stimuli have been…

Tissues and Organs · Quantitative Biology 2023-06-02 Javiera Jilberto , Samuel J. DePalma , Jason Lo , Hiba Kobeissi , Lani Quach , Emma Lejeune , Brendon M. Baker , David Nordsletten

We present a novel approach aimed at high-performance uncertainty quantification for time-dependent problems governed by partial differential equations. In particular, we consider input uncertainties described by a Karhunen-Loeeve expansion…

Computational Engineering, Finance, and Science · Computer Science 2021-02-05 Seif Ben Bader , Pietro Benedusi , Alessio Quaglino , Patrick Zulian , Rolf Krause

Numerical radiation-hydrodynamics (RHD) for non-relativistic flows is a challenging problem because it encompasses processes acting over a very broad range of timescales, and where the relative importance of these processes often varies by…

Instrumentation and Methods for Astrophysics · Physics 2024-07-29 Chong-Chong He , Benjamin D. Wibking , Mark R. Krumholz

We present a probabilistic framework for modeling structured spatiotemporal dynamics from sparse observations, focusing on cardiac motion. Our approach integrates neural ordinary differential equations (NODEs), graph neural networks (GNNs),…

Machine Learning · Computer Science 2025-09-17 Jaume Banus , Augustin C. Ogier , Roger Hullin , Philippe Meyer , Ruud B. van Heeswijk , Jonas Richiardi

There is a broad need in the neuroscience community to understand and visualize large-scale recordings of neural activity, big data acquired by tens or hundreds of electrodes simultaneously recording dynamic brain activity over minutes to…

Neurons and Cognition · Quantitative Biology 2015-11-24 Bingni W. Brunton , Lise A. Johnson , Jeffrey G. Ojemann , J. Nathan Kutz

We present a novel approach to investigate the long-time stochastic dynamics of multi-dimensional classical systems, in contact with a heat-bath. When the potential energy landscape is rugged, the kinetics displays a decoupling of short and…

Soft Condensed Matter · Physics 2013-05-29 O. Corradini , P. Faccioli , H. Orland

We present an efficient quantum algorithm for simulating the dynamics of Markovian open quantum systems. The performance of our algorithm is similar to the previous state-of-the-art quantum algorithm, i.e., it scales linearly in evolution…

Quantum Physics · Physics 2023-07-11 Xiantao Li , Chunhao Wang

It is generally assumed that all cells in models of the electrical behavior of cardiac tissue have the same properties. However, there are differences in cardiac cells that are not well characterized but cause spatial heterogeneity of the…

Tissues and Organs · Quantitative Biology 2024-12-11 Alejandro Nieto Ramos , Elizabeth M. Cherry

Data movement is becoming the dominant contributor to the time and energy costs of computation across a wide range of application domains. However, time complexity is inadequate to analyze data movement. This work expands upon Data Movement…

Data Structures and Algorithms · Computer Science 2022-03-08 Wesley Smith , Aidan Goldfarb , Chen Ding

Purpose: To develop a cardiac T1 mapping method for free-breathing 3D T1 mapping of the whole heart at 3T with transmit B1 (B1+) correction Methods: A free-breathing, ECG-gated inversion recovery sequence with spoiled gradient-echo readout…

Medical Physics · Physics 2021-11-16 Paul Kyu Han , Thibault Marin , Yanis Djebra , Vanessa Landes , Yue Zhuo , Georges El Fakhri , Chao Ma

Efficient and faithful parallel simulation of large asynchronous systems is a challenging computational problem. It requires using the concept of local simulated times and a synchronization scheme. We study the scalability of massively…

Statistical Mechanics · Physics 2007-05-23 G. Korniss , M. A. Novotny , P. A. Rikvold , H. Guclu , Z. Toroczkai

Characterising the representation of sensory stimuli in the brain is a fundamental scientific endeavor, which can illuminate principles of information coding. Most characterizations reduce the dimensionality of neural data by converting…

Neurons and Cognition · Quantitative Biology 2024-01-23 James B Isbister

The time domain analysis of eddy current problems often requires the simulation of long time intervals, e.g. until a steady state is reached. Fast-switching excitations e.g. in pulsedwidth modulated signals require in addition very small…

Numerical Analysis · Mathematics 2021-01-05 Idoia Cortes Garcia , Iryna Kulchytska-Ruchka , Markus Clemens , Sebastian Schöps