English
Related papers

Related papers: Order parametr for design of proteinlike heteropol…

200 papers

A molecular understanding of how protein function is related to protein structure will require an ability to understand large conformational changes between multiple states. Unfortunately these states are often separated by high free energy…

Biological Physics · Physics 2011-08-08 Juan R. Perilla , Thomas B. Woolf

Order parameters based on spherical harmonics and Fourier coefficients already play a significant role in condensed matter research in the context of systems of spherical or point particles. Here, we extend these types of order parameter to…

Soft Condensed Matter · Physics 2010-12-22 Aaron S. Keys , Christopher R. Iacovella , Sharon C. Glotzer

In the last two decades, a vast variety of topological phases have been described, predicted, classified, proposed, and measured. While there is a certain unity in method and philosophy, the phenomenology differs wildly. This work deals…

Strongly Correlated Electrons · Physics 2023-01-31 Lorenz P. Mayer

When solving the Hamiltonian path problem it seems natural to be given additional precedence constraints for the order in which the vertices are visited. For example one could decide whether a Hamiltonian path exists for a fixed starting…

Discrete Mathematics · Computer Science 2025-02-28 Jesse Beisegel , Fabienne Ratajczak , Robert Scheffler

We consider the problem of finding a Hamiltonian path with precedence constraints in the form of a partial order on the vertex set. This problem is known as Partially Ordered Hamiltonian Path Problem (POHPP). Here, we study the complexity…

Discrete Mathematics · Computer Science 2025-03-06 Jesse Beisegel , Katharina Klost , Kristin Knorr , Fabienne Ratajczak , Robert Scheffler

Many physical systems are well modeled as collections of interacting particles. Nevertheless, a general approach to quantifying the absolute degree of order immediately surrounding a particle has yet to be described. Motivated thus, we…

Mathematical Physics · Physics 2022-03-08 John Çamkıran , Fabian Parsch , Glenn D. Hibbard

This article grew out of the theoretical part of my Master's thesis at the Faculty of Mathematics and Information Science at Ruprecht-Karls-Universit\"at Heidelberg under the supervision of PD Dr. Andreas Ott. Following the work of G.…

Algebraic Topology · Mathematics 2022-07-08 Maximilian Neumann

Ordering ambiguity associated with the von Roos position dependent mass (PDM) Hamiltonian is considered. An affine locally scaled first order differential introduced, in Eq.(9), as a PDM-pseudo-momentum operator. Upon intertwining our…

Quantum Physics · Physics 2009-11-13 Omar Mustafa , S. Habib Mazharimousavi

This paper has been withdrawn. A much-improved version can be found at hep-ph/0209176.

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Marcelo Gleiser , Rafael C. Howell

The paper that was here is a preprint that was never turned into a proper paper. In particular it does not have enough citations to the literature. The paper "The Slice Algorithm For Irreducible Decomposition of Monomial Ideals" contains a…

Combinatorics · Mathematics 2009-11-11 Bjarke Hammersholt Roune

Quantum gas microscopy has developed into a powerful tool to explore strongly correlated quantum systems. However, discerning phases with topological or off-diagonal long range order requires the ability to extract these correlations from…

Strongly Correlated Electrons · Physics 2024-08-09 Bo Xiao , Javier Robledo Moreno , Matthew Fishman , Dries Sels , Ehsan Khatami , Richard Scalettar

This letter announces and summarizes results obtained in arXiv:1111.5051 and considers several natural extensions. The aforementioned paper proposes a procedure to reconstruct coefficients in a second-order, scalar, elliptic equation from…

Analysis of PDEs · Mathematics 2012-03-07 Guillaume Bal , Gunther Uhlmann

The functional defined as the squared modulus of the spatial average of the wave function squared, plays the role of an ``order parameter'' for the transition between Hamiltonian ensembles with orthogonal and unitary symmetry. Upon breaking…

Condensed Matter · Physics 2008-02-03 S. A. van Langen , P. W. Brouwer , C. W. J. Beenakker

Model order reduction provides low-complexity high-fidelity surrogate models that allow rapid and accurate solutions of parametric differential equations. The development of reduced order models for parametric \emph{nonlinear} Hamiltonian…

Numerical Analysis · Mathematics 2024-09-30 Cecilia Pagliantini , Federico Vismara

This paper studies three natural pre-orders of increasing generality on the set of all completely non-unitary partial isometries with equal defect indices. We show that the problem of determining when one partial isometry is less than…

Functional Analysis · Mathematics 2021-02-05 Stephan Ramon Garcia , Robert T. W. Martin , William T. Ross

There have been comments on the starting paper, hep-th/0106074, which point out unclear motivation and definitions on noncommutative momentum introduced. Therefore, this paper is withdrawn by the author for more clear presentation.

High Energy Physics - Theory · Physics 2007-05-23 C. Shio

We study the orthogonality catastrophe due to a parametric change of the single-particle (mean field) Hamiltonian of an ergodic system. The Hamiltonian is modeled by a suitable random matrix ensemble. We show that the overlap between the…

Mesoscale and Nanoscale Physics · Physics 2009-11-07 Raul O. Vallejos , Caio H. Lewenkopf , Yuval Gefen

A reduced-order model based on Proper Orthogonal Decomposition (POD) is proposed for the bidomain equations of cardiac electrophysiology. Its accuracy is assessed through electrocardiograms in various configurations, including myocardium…

Numerical Analysis · Mathematics 2012-07-23 Muriel Boulakia , Elisa Schenone , Jean-Frédéric Gerbeau

This paper examines the use of Lie group and Lie Algebra theory to construct the geometry of pairwise comparisons matrices. The Hadamard product (also known as coordinatewise, coordinate-wise, elementwise, or element-wise product) is…

General Mathematics · Mathematics 2021-05-24 W. W. Koczkodaj , V. W. Marek , Y. Yayli

We comment on a recent manuscript "Ether of Orbifolds" by Henry Lamm. In the first version, it was mistakenly claimed that the orbifold lattice Hamiltonian is not gauge invariant, and a quantity $\epsilon_g$, which has nothing to do with a…

High Energy Physics - Lattice · Physics 2026-04-21 Masanori Hanada
‹ Prev 1 2 3 10 Next ›