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Topological landscape is introduced for networks with functions defined on the nodes. By extending the notion of gradient flows to the network setting, critical nodes of different indices are defined. This leads to a concise and…

Methodology · Statistics 2012-05-01 E. Weinan , Jianfeng Lu , Yuan Yao

We provide a rigorous solution to the problem of constructing a structural evolution for a network of coupled identical dynamical units that switches between specified topologies without constraints on their structure. The evolution of the…

Physics and Society · Physics 2016-01-20 Charo I. del Genio , Miguel Romance , Regino Criado , Stefano Boccaletti

The interplay between topology and dynamics in complex networks is a fundamental but widely unexplored problem. Here, we study this phenomenon on a prototype model in which the network is shaped by a dynamical variable. We couple the…

Statistical Mechanics · Physics 2008-06-13 Diego Garlaschelli , Andrea Capocci , Guido Caldarelli

We introduce a novel approach to description of networks/graphs. It is based on an analogue physical model which is dynamically evolved. This evolution depends on the connectivity matrix and readily brings out many qualitative features of…

Statistical Mechanics · Physics 2007-05-23 Vladimir Gudkov , Joseph E. Johnson , Shmuel Nussinov

Many real-world complex networks arise as a result of a competition between growth and rewiring processes. Usually the initial part of the evolution is dominated by growth while the later one rather by rewiring. The initial growth allows…

Statistical Mechanics · Physics 2020-10-07 Zdzislaw Burda , Michalina Kotwica , Krzysztof Malarz

Networks are useful for describing systems of interacting objects, where the nodes represent the objects and the edges represent the interactions between them. The applications include chemical and metabolic systems, food webs as well as…

Computational Physics · Physics 2009-10-20 Baruch Barzel , Ofer Biham

We explore the interplay of network structure, topology, and dynamic interactions between nodes using the paradigm of distributed synchronization in a network of coupled oscillators. As the network evolves to a global steady state,…

Disordered Systems and Neural Networks · Physics 2015-06-04 Kristina Lerman , Rumi Ghosh

The behavior of complex systems is determined not only by the topological organization of their interconnections but also by the dynamical processes taking place among their constituents. A faithful modeling of the dynamics is essential…

Physics and Society · Physics 2015-05-20 R. Lambiotte , R. Sinatra , J. -C. Delvenne , T. S. Evans , M. Barahona , V. Latora

Modeling Internet growth is important both for understanding the current network and to predict and improve its future. To date, Internet models have typically attempted to explain a subset of the following characteristics: network…

Networking and Internet Architecture · Computer Science 2008-06-25 Petter Holme , Josh Karlin , Stephanie Forrest

For real-world complex system constantly enduring perturbation, to achieve survival goal in changing yet unknown environments, the central problem is constantly adapting themself to external environments according to environmental feedback.…

Adaptation and Self-Organizing Systems · Physics 2024-10-31 Mingyang Bai , Daqing Li

The interaction between natural selection and random mutation is frequently debated in recent years. Does similar dilemma also exist in the evolution of real networks such as biological networks? In this paper, we try to discuss this issue…

Statistical Mechanics · Physics 2009-01-07 Zhen Shao , Hai-jun Zhou

Neuronal networks constitute a special class of dynamical systems, as they are formed by individual geometrical components, namely the neurons. In the existing literature, relatively little attention has been given to the influence of…

Neurons and Cognition · Quantitative Biology 2015-05-13 Sebastian Ahnert , Luciano da Fontoura Costa

For many networks, the connection pattern (often called the topology) can vary in time, depending on the changing state, or mode, of the modules within the network. For example, "airplane mode" is the name for one communicative mode of a…

Dynamical Systems · Mathematics 2015-12-15 David I. Spivak , Joshua Z. Tan

We consider a solution of automata similar to Population Protocols and Network Constructors. The automata (or nodes) move passively in a well-mixed solution and can cooperate by interacting in pairs. Every such interaction may result in an…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-04-01 Othon Michail

The network structure (or topology) of a dynamical network is often unavailable or uncertain. Hence, we consider the problem of network reconstruction. Network reconstruction aims at inferring the topology of a dynamical network using…

Optimization and Control · Mathematics 2018-09-26 Henk J. van Waarde , Pietro Tesi , M. Kanat Camlibel

Complex dynamical systems are often modeled as networks, with nodes representing dynamical units which interact through the network's links. Gene regulatory networks, responsible for the production of proteins inside a cell, are an example…

Statistical Mechanics · Physics 2009-09-30 Zoran Levnajić

Complex networks have become powerful mechanisms for studying a variety of realworld systems. Consequently, many human-designed network models are proposed that reproduce nontrivial properties of complex networks, such as long-tail degree…

Social and Information Networks · Computer Science 2018-10-05 Niousha Attar , Sadegh Aliakbary

We analyze a model of interacting agents (e.g. prebiotic chemical species) which are represended by nodes of a network, whereas their interactions are mapped onto directed links between these nodes. On a fast time scale, each agent follows…

Populations and Evolution · Quantitative Biology 2009-11-13 Adrian M. Seufert , Frank Schweitzer

The topology of a network directly influences the behaviour and controllability of dynamical processes on that network. Therefore, the design of network topologies is an important area of research when examining the control of distributed…

Optimization and Control · Mathematics 2016-09-29 Mathias Hudoba de Badyn , Mehran Mesbahi

A framework integrating information theory and network science is proposed, giving rise to a potentially new area. By incorporating and integrating concepts such as complexity, coding, topological projections and network dynamics, the…

Information Theory · Computer Science 2019-04-10 Henrique F. de Arruda , Filipi N. Silva , Cesar H. Comin , Diego R. Amancio , Luciano da F. Costa