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Related papers: Measuring spike train synchrony

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A wide variety of approaches to estimate the degree of synchrony between two or more spike trains have been proposed. One of the most recent methods is the ISI-distance which extracts information from the interspike intervals (ISIs) by…

Biological Physics · Physics 2012-12-11 Thomas Kreuz , Daniel Chicharro , Martin Greschner , Ralph G Andrzejak

Measures of multiple spike train synchrony are essential in order to study issues such as spike timing reliability, network synchronization, and neuronal coding. These measures can broadly be divided in multivariate measures and averages…

Neurons and Cognition · Quantitative Biology 2012-12-11 T. Kreuz , D. Chicharro , R. G. Andrzejak , J. S. Haas , H. D. I. Abarbanel

Measures of spike train synchrony have proven a valuable tool in both experimental and computational neuroscience. Particularly useful are time-resolved methods such as the ISI- and the SPIKE-distance, which have already been applied in…

Neurons and Cognition · Quantitative Biology 2015-11-09 Mario Mulansky , Nebojsa Bozanic , Andreea Sburlea , Thomas Kreuz

Measures of spike train synchrony have become important tools in both experimental and theoretical neuroscience. Three time-resolved measures called the ISI-distance, the SPIKE-distance, and SPIKE-synchronization have already been…

Data Analysis, Statistics and Probability · Physics 2020-01-14 Eero Satuvuori , Irene Malvestio , Thomas Kreuz

Recently, the SPIKE-distance has been proposed as a parameter-free and time-scale independent measure of spike train synchrony. This measure is time-resolved since it relies on instantaneous estimates of spike train dissimilarity. However,…

Data Analysis, Statistics and Probability · Physics 2012-12-11 Thomas Kreuz , Daniel Chicharro , Conor Houghton , Ralph G Andrzejak , Florian Mormann

Background: Measures of spike train synchrony are widely used in both experimental and computational neuroscience. Time-scale independent and parameter-free measures, such as the ISI-distance, the SPIKE-distance and SPIKE-synchronization,…

Data Analysis, Statistics and Probability · Physics 2017-05-31 Eero Satuvuori , Mario Mulansky , Nebojsa Bozanic , Irene Malvestio , Fleur Zeldenrust , Kerstin Lenk , Thomas Kreuz

Background: It is commonly assumed in neuronal coding that repeated presentations of a stimulus to a coding neuron elicit similar responses. One common way to assess similarity are spike train distances. These can be divided into…

Neurons and Cognition · Quantitative Biology 2018-02-22 Eero Satuvuori , Thomas Kreuz

By introducing the twin concepts of reliability and precision along with the corresponding measures, Mainen and Sejnowski's seminal 1995 paper "Reliability of spike timing in neocortical neurons" (Mainen and Sejnowski, 1995) paved the way…

Neurons and Cognition · Quantitative Biology 2025-10-09 Thomas Kreuz

Techniques for recording large-scale neuronal spiking activity are developing very fast. This leads to an increasing demand for algorithms capable of analyzing large amounts of experimental spike train data. One of the most crucial and…

Data Analysis, Statistics and Probability · Physics 2015-04-16 Thomas Kreuz , Mario Mulansky , Nebojsa Bozanic

Statistical similarities between neuronal spike trains could reveal significant information on complex underlying processing. In general, the similarity between synchronous spike trains is somewhat easy to identify. However, the similar…

Neurons and Cognition · Quantitative Biology 2021-03-16 Sathish Ande , Jayanth R Regatti , Neha Pandey , Ajith Karunarathne , Lopamudra Giri , Soumya Jana

Approaches to predicting neuronal spike responses commonly use a Poisson learning objective. This objective quantizes responses into spike counts within a fixed summation interval, typically on the order of 10 to 100 milliseconds in…

Neurons and Cognition · Quantitative Biology 2024-07-03 Kevin Doran , Marvin Seifert , Carola A. M. Yovanovich , Tom Baden

The simple system composed of three neural-like noisy elements is considered. Two of them (sensory neurons or sensors) are stimulated by noise and periodic signals with different ratio of frequencies, and the third one (interneuron)…

Disordered Systems and Neural Networks · Physics 2010-12-07 Yuriy V. Ushakov , Alexander A. Dubkov , Bernardo Spagnolo

As synchronized activity is associated with basic brain functions and pathological states, spike train synchrony has become an important measure to analyze experimental neuronal data. Many different measures of spike train synchrony have…

The distance between a pair of spike trains, quantifying the differences between them, can be measured using various metrics. Here we introduce a new class of spike train metrics, inspired by the Pompeiu-Hausdorff distance, and compare them…

Information Theory · Computer Science 2014-01-20 Cătălin V. Rusu , Răzvan V. Florian

The mutual information between stimulus and spike-train response is commonly used to monitor neural coding efficiency, but neuronal computation broadly conceived requires more refined and targeted information measures of input-output joint…

Neurons and Cognition · Quantitative Biology 2015-04-21 Sarah E. Marzen , Michael R. DeWeese , James P. Crutchfield

We wish to discriminate spike sequences based on the degree of irregularity. For this purpose, we search for a rational expressions of quadratic functions of consecutive interspike intervals that efficiently measures spiking irregularity.…

Neurons and Cognition · Quantitative Biology 2007-05-23 K. Miura , M. Okada , S. Shinomoto

We present the mathematical basis of a new approach to the analysis of temporal coding. The foundation of the approach is the construction of several families of novel distances (metrics) between neuronal impulse trains. In contrast to most…

Neurons and Cognition · Quantitative Biology 2007-05-23 Jonathan D. Victor , Keith P. Purpura

A common way of studying the relationship between neural activity and behavior is through the analysis of neuronal spike trains that are recorded using one or more electrodes implanted in the brain. Each spike train typically contains…

Applications · Statistics 2011-04-15 Mengxin Li , Wei-Liem Loh

Neural spike trains, which are sequences of very brief jumps in voltage across the cell membrane, were one of the motivating applications for the development of point process methodology. Early work required the assumption of stationarity,…

Applications · Statistics 2011-08-01 Robert E. Kass , Ryan C. Kelly , Wei-Liem Loh

Understanding the interaction patterns among simultaneous recordings of spike trains from multiple neuronal units is a key topic in neuroscience. However, an optimal approach of assessing these interactions has not been established, as…

Neurons and Cognition · Quantitative Biology 2020-12-17 Gorana Mijatovic , Yuri Antonacci , Tatjana Loncar-Turukalo , Ludovico Minati , Luca Faes
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