English
Related papers

Related papers: Untying molecular friction knots

200 papers

The characterization of the interactions between two fully flexible self-avoiding polymers is one of the classic and most important problems in polymer physics. In this paper we measure these interactions in the presence of active…

Soft Condensed Matter · Physics 2022-04-06 M. C. Gandikota , A. Cacciuto

Knotted and tangled structures frequently appear in physical fields, but so do mechanisms for untying them. To understand how this untying works, we simulate the behavior of 1,458 superfluid vortex knots of varying complexity and scale in…

Fluid Dynamics · Physics 2016-07-20 Dustin Kleckner , Louis H. Kauffman , William T. M. Irvine

Common experience tells us that a knot significantly weakens the polymer strand in which it is tied, which in turn leads to more facile chain rupture under tensile loading. Using first-principles molecular dynamics calculations we describe…

Materials Science · Physics 2016-08-31 A. Marco Saitta , Michael L. Klein

We use Brownian dynamics simulations and advanced topological profiling methods to characterize the out-of-equilibrium evolution of self-entanglement in linear polymers confined into nano-channels and under periodic compression. We…

Soft Condensed Matter · Physics 2020-06-22 Davide Michieletto , Enzo Orlandini , Matthew S Turner , Cristian Micheletti

Scales engagement can contribute significantly to nonlinear bending behavior of elastic substrates with rigid biomimetic scales. In this letter, we investigate the role of friction in modulating the nonlinearity that arises due to…

Materials Science · Physics 2015-08-14 Ranajay Ghosh , Hamid Ebrahimi , Ashkan Vaziri

We consider mechanically generated molecular braids composed of two molecules where long range interactions between them can be considered to be very weak. We describe a model that takes account of the thermal fluctuations of the braid,…

Soft Condensed Matter · Physics 2013-12-23 D. J. Lee

Tunable mechanics and fracture resistance are hallmarks of biological tissues and highly desired in engineered materials. To elucidate the underlying mechanisms, we study a rigidly percolating double network (DN) made of a stiff and a…

Soft Condensed Matter · Physics 2020-08-25 Pancy Lwin , Andrew Sindermann , Leo Sutter , Thomas Wyse Jackson , Lawrence Bonassar , Itai Cohen , Moumita Das

We use numerical simulations to study tangentially active flexible ring polymers with different knot topologies. Simple, unknotted active rings display a transition from an extended phase to a collapsed one upon increasing the degree of…

Soft Condensed Matter · Physics 2025-08-01 Davide Breoni , Emanuele Locatelli , Luca Tubiana

We present a molecular dynamics study of the influence of knot complexity and molecular mass on glass formation upon cooling in knotted ring polymer melts. We find that cooperative motion, rigidity, and glassy dynamics can be tuned over a…

Soft Condensed Matter · Physics 2026-03-17 Yue-Tong Dong , Jack F. Douglas , Wen-Sheng Xu

We show that the friction force and torque, acting at a dry contact of two objects moving and rotating relative to each other, are inherently coupled. As a simple test system, a sliding and spinning disk on a horizontal flat surface is…

Classical Physics · Physics 2009-11-07 Zeno Farkas , Guido Bartels , Tamas Unger , Dietrich E. Wolf

Spontaneous formation of knots in long polymers at equilibrium is inevitable but becomes rare in sufficiently short chains. Here, we show that knotting and knot complexity increase by orders of magnitude in diblock polymers with a fraction…

Soft Condensed Matter · Physics 2024-07-11 Marin Vatin , Enzo Orlandini , Emanuele Locatelli

A ring polymer in a confining space may exhibit at least two phases, namely an expanded (or solvent-rich phase) if its concentration is small, or a collapsed (or polymer-rich phase) when it is concentrated and compressed. These phases are…

Soft Condensed Matter · Physics 2026-03-24 EJ Janse van Rensburg , E Orlandini , MC Tesi

Granular chain packings exhibit a striking emergent strain-stiffening behavior despite the individual looseness of the constitutive chains. Using indentation experiments on such assemblies, we measure an exponential increase in the…

Soft Condensed Matter · Physics 2018-04-02 Denis Dumont , Maurine Houze , Paul Rambach , Thomas Salez , Sylvain Patinet , Pascal Damman

This study investigated, experimentally and numerically, the fracturing behavior of thermoset polymer structures featuring cracks and sharp u-notches. It is shown that, even for cases in which the sharpness of the notch would suggest…

Soft Condensed Matter · Physics 2018-12-17 Yao Qiao , Marco Salviato

Using molecular dynamics we study the dependence of the friction force on the sliding speed when an elastic slab (block) is sliding on a rigid substrate with a ${\rm sin} (q_0 x)$ surface height profile. The friction force is nearly…

Soft Condensed Matter · Physics 2020-02-24 J. Wang , A. Tiwari , I. M. Sivebaek , B. N. J Persson

We employ computer simulations and thermodynamic integration to analyse the effects of bending rigidity and slit confinement on the free energy cost of tying knots, $\Delta F_{\rm knotting}$, on polymer chains under tension. A…

Soft Condensed Matter · Physics 2014-05-15 Peter Poier , Christos N. Likos , Richard Matthews

Molecular dynamics simulations are used to study a unique expanded jammed state. Tension transforms many glassy polymers from a dense glass to a network of fibrils and voids called a craze. Entanglements between polymers and interchain…

Soft Condensed Matter · Physics 2009-11-07 Jörg Rottler , Mark O. Robbins

Stochastic simulations are used to characterize the knotting distributions of random ring polymers confined in spheres of various radii. The approach is based on the use of multiple Markov chains and reweighting techniques, combined with…

Soft Condensed Matter · Physics 2009-11-11 C. Micheletti , D. Marenduzzo , E. Orlandini , D. W. Sumners

We examine computer experiments that can be performed to understand the dynamics of knots under self-repulsion. In the course of specific computer exploration we use the knot theory of rational knots and rational tangles to produce classes…

Geometric Topology · Mathematics 2021-09-28 Louis H Kauffman

Vortex knots have been seen decaying in many physical systems. Here we describe topologically protected vortex knots, which remain stable and undergo fusion and fission while conserving a topological invariant analogous to that of baryon…

Soft Condensed Matter · Physics 2025-08-11 Darian Hall , Jung-Shen Benny Tai , Louis H. Kauffman , Ivan I. Smalyukh