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Interactions between proteins and their solvent environment can be studied in a bottom-up approach using hydrogen-bonded chromophore-solvent clusters. The ultrafast dynamics following UV-light-induced electronic excitation of the…

Chemical Physics · Physics 2022-12-06 Jolijn Onvlee , Sebastian Trippel , Jochen Küpper

In the context of natural-based wastewater treatment technologies (such as constructed wetlands - CW) the use of a low-cost, continuous-like biosensor tool for the assessment of operational conditions is of key importance for plant…

Quantitative Methods · Quantitative Biology 2020-04-01 C. Corbella , M. Hartl , M. Fernandez-gatell , J. Puigagut

This paper demonstrates that disposable polyester-toner microfluidic devices are suitable to produce either water-in-oil (W/O) or oil-in-water (O/W) droplets without using any surface treatment of the microchannels walls. Highly…

Biomolecular condensates are liquid- or gel-like droplets of proteins and nucleic acids formed at least in part through liquid-liquid phase separation. Condensates enable diverse functions of cells and the pathogens that infect them,…

Soft Condensed Matter · Physics 2025-05-16 Layne B. Frechette , Naren Sundararajan , Fernando Caballero , Anthony Trubiano , Michael F. Hagan

Droplets form a cornerstone of the spatiotemporal organization of biomolecules in cells. These droplets are controlled using physical processes like chemical reactions and imposed gradients, which are costly to simulate using traditional…

Soft Condensed Matter · Physics 2022-06-23 Ajinkya Kulkarni , Estefania Vidal-Henriquez , David Zwicker

Various microorganisms and some mammalian cells are able to swim in viscous fluids by performing nonreciprocal body deformations, such as rotating attached flagella or by distorting their entire body. In order to perform chemotaxis, i.e. to…

Biological Physics · Physics 2021-05-06 Benedikt Hartl , Maximilian Hübl , Gerhard Kahl , Andreas Zöttl

Hydrogen fuel cells are a key technology in the transition toward carbon-neutral energy systems, offering clean power with water as the only byproduct. Microfluidic fuel cells, which operate at the microliter scale, are an emerging variant…

Computational Engineering, Finance, and Science · Computer Science 2026-03-31 Michel Takken , Robert Wille

Colloidal particles can create reconfigurable nanomaterials, with applications such as color-changing, self-repairing, and self-regulating materials and reconfigurable drug delivery systems. However, top-down methods for manipulating…

Soft Condensed Matter · Physics 2024-07-26 Mark N. McDonald , Cameron K. Peterson , Douglas R. Tree

Droplets are essential for spatially controlling biomolecules in cells. To work properly, cells need to control the emergence and morphology of droplets. On the one hand, driven chemical reactions can affect droplets profoundly. For…

Soft Condensed Matter · Physics 2024-03-14 Noah Ziethen , David Zwicker

Biochemical reactions typically occur at low copy numbers, but at once in crowded and diverse environments. Space and stochasticity therefore play an essential role in biochemical networks. Spatial-stochastic simulations have become a…

Multiple emulsions offer a compelling route to confine nucleation and growth during drug precipitation, yet their practical use is frequently limited by kinetic fragility and sensitivity to formulation and processing conditions. Here, we…

Soft Condensed Matter · Physics 2026-03-03 Umesh Dhumal

We present a mesoscale representation of near-contact interactions between colliding droplets which permits to reach up to the scale of full microfluidic devices, where such droplets are produced. The method is demonstrated for the case of…

Computational Physics · Physics 2020-06-23 Andrea Montessori , Marco Lauricella , Adriano Tiribocchi , Sauro Succi

Microfluidic cytometers based on coulter principle have recently shown a great potential for point of care biosensors for medical diagnostics. In this study, the design of coulter based microfluidic cytometer is investigated by using…

Cell Behavior · Quantitative Biology 2019-10-29 Sheikh Muhammad Asher Iqbal , Nauman Zaffar Butt

Pathogens in droplets on fomites and aerosols go through extreme physiochemical conditions, such as confinement and osmotic stress, due to evaporation. Still, these droplets are the predominant transmission routes of many contagious…

Soft Condensed Matter · Physics 2021-08-10 Maheshwar Gopu , Akanksha Agrawal , Raju Mukherjee , Dileep Mampallil

Calcein leakage assays are a standard experimental set-up for probing the extent of damage induced by external agents on synthetic lipid vesicles. The fluorescence signal associated with calcein release from liposomes is the signature of…

Computational Physics · Physics 2019-01-11 Sebastian Salassi , Federica Simonelli , Alessio Bartocci , Giulia Rossi

Microsecond time-resolved cryo-electron microscopy has emerged as a novel approach for directly observing proteins dynamics. By providing microsecond temporal and near-atomic spatial resolution, it has the potential to elucidate a wide…

Biological Physics · Physics 2024-02-27 Ulrich J. Lorenz

In this paper we present a derivation and multiscale analysis of a mathematical model for plant cell wall biomechanics that takes into account both the microscopic structure of a cell wall coming from the cellulose microfibrils and the…

Analysis of PDEs · Mathematics 2016-01-01 Mariya Ptashnyk , Brian Seguin

Biomolecular condensates play a central role in the spatial organization of living matter. Their formation is now well understood as a form of liquid-liquid phase separation that occurs very far from equilibrium. For instance, they can be…

Soft Condensed Matter · Physics 2024-10-14 Roxanne Berthin , Jacques Fries , Marie Jardat , Vincent Dahirel , Pierre Illien

The biogenesis of lipid droplets (LD) in the yeast Saccharomyces cerevisiae was theoretically investigated on basis of a biophysical model. In accordance with the prevailing model of LD formation, we assumed that neutral lipids oil-out…

Subcellular Processes · Quantitative Biology 2009-10-30 J. Zanghellini , F. Wodlei , H. -H. von Gruenberg

Biological cells utilize membranes and liquid-like droplets, known as biomolecular condensates, to structure their interior. The interaction of droplets and membranes, despite being involved in several key biological processes, is so far…

Soft Condensed Matter · Physics 2024-02-21 Marcel Mokbel , Dominic Mokbel , Susanne Liese , Christoph A. Weber , Sebastian Aland