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Related papers: A simplex model for layered niche networks

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A multiplex is a collection of network layers, each representing a specific type of edges. This appears to be a genuine representation for many real-world systems. However, due to a variety of potential factors, such as limited budget and…

Physics and Society · Physics 2023-02-22 Daniel Kaiser , Siddharth Patwardhan , Filippo Radicchi

This paper will introduce a theory of emergent animal social complexity using various results from computational models and empirical results. These results will be organized into a vertical model of social complexity. This will support the…

Populations and Evolution · Quantitative Biology 2013-10-18 Bradly Alicea

Understanding how internal community structure shapes the course of epidemics remains a fundamental challenge in modeling real-world populations. Standard metapopulation models often assume uniform mixing within communities, overlooking how…

Physics and Society · Physics 2025-11-07 Haoyang Qian , Malbor Asllani

One of the reasons behind the success of Social Network Analysis is its simple and general graph model made of nodes (representing individuals) and ties. However, when we focus on our daily on-line experience we must confront a more complex…

Social and Information Networks · Computer Science 2012-11-02 Matteo Magnani , Luca Rossi

Understanding how sustainable behaviors spread within heterogeneous societies requires the integration of behavioral data, social influence mechanisms, and structured approaches to control. In this paper, we propose a data-driven…

Social and Information Networks · Computer Science 2025-11-17 Martina Alutto , Sofia Bellotti , Fabrizio Dabbene , Chiara Ravazzi

Elements of networks interact in many ways, so modeling them with graphs requires multiple types of edges (or network layers). Here we show that such multiplex networks are generically more vulnerable to global cascades than simplex…

Physics and Society · Physics 2012-05-01 Charles D. Brummitt , Kyu-Min Lee , K. -I. Goh

We present ONION, a multi-layered framework for participatory Entity-Relationship (ER) modeling that integrates insights from design justice, participatory AI, and conceptual modeling. ONION introduces a five-stage methodology: Observe,…

Databases · Computer Science 2025-07-14 Viktoriia Makovska , George Fletcher , Julia Stoyanovich

Attention is fundamental to cognition, yet it remains a challenge to understand attention in tasks approaching real-world complexity. Here, we approached this problem by modeling gaze patterns of monkeys playing Pac-Man. We first show a…

Neurons and Cognition · Quantitative Biology 2025-08-12 Zhongqiao Lin , Yunwei Li , Tianming Yang

Despite the central role of self-assembled groups in animal and human societies, statistical tools to explain their composition are limited. We introduce a statistical framework for cross-sectional observations of groups with exclusive…

Methodology · Statistics 2021-08-03 Marion Hoffman , Per Block , Tom A. B. Snijders

Mathematical and computational models can assist in gaining an understanding of cell behavior at many levels of organization. Here, we review models in the literature that focus on eukaryotic cell motility at 3 size scales: intracellular…

Cell Behavior · Quantitative Biology 2021-01-27 Andreas Buttenschön , Leah Edelstein-Keshet

Interactions between people and ecological systems, through leisure or tourism activities, form a complex socio-ecological spatial network. The analysis of the benefits people derive from their interactions with nature -- also referred to…

Network data often arises via a series of structured interactions among a population of constituent elements. E-mail exchanges, for example, have a single sender followed by potentially multiple receivers. Scientific articles, on the other…

Methodology · Statistics 2019-01-30 Walter Dempsey , Brandon Oselio , Alfred Hero

Despite being a source of rich information, graphs are limited to pairwise interactions. However, several real-world networks such as social networks, neuronal networks, etc., involve interactions between more than two nodes. Simplicial…

Data Analysis, Statistics and Probability · Physics 2022-02-01 Sanjukta Krishnagopal , Ginestra Bianconi

Species interaction networks are a powerful tool for describing ecological communities; they typically contain nodes representing species, and edges representing interactions between those species. For the purposes of drawing abstract…

Machine Learning · Computer Science 2025-02-25 Sanaz Hasanzadeh Fard , Emily Dolson

In these six lectures, we examine what can be learnt about the behavior of multi-layer neural networks from the analysis of linear models. We first recall the correspondence between neural networks and linear models via the so-called lazy…

Machine Learning · Statistics 2023-08-28 Theodor Misiakiewicz , Andrea Montanari

Identifying undocumented or potential future interactions among species is a challenge facing modern ecologists. Recent link prediction methods rely on trait data, however large species interaction databases are typically sparse and…

Applications · Statistics 2019-09-23 Mohamad Elmasri , Maxwell J. Farrell , T. Jonathan Davies , David A. Stephens

An individual-based model of the infectious disease spread among the urban population is considered. A system of stochastic equations, which describes changes in quantities of four population groups, susceptible, exposed, infected…

Populations and Evolution · Quantitative Biology 2011-11-11 Vasiliy Leonenko

Many real-world networks, including nervous systems, exhibit meso-scale structure. This means that their elements can be grouped into meaningful sub-networks. In general, these sub-networks are unknown ahead of time and must be "discovered"…

Neurons and Cognition · Quantitative Biology 2020-11-16 Richard F. Betzel

The mental lexicon is a complex cognitive system representing information about the words/concepts that one knows. Decades of psychological experiments have shown that conceptual associations across multiple, interactive cognitive levels…

Computation and Language · Computer Science 2022-10-04 Massimo Stella , Salvatore Citraro , Giulio Rossetti , Daniele Marinazzo , Yoed N. Kenett , Michael S. Vitevitch

The Linear Threshold Model is a widely used model that describes how information diffuses through a social network. According to this model, an individual adopts an idea or product after the proportion of their neighbors who have adopted it…

Social and Information Networks · Computer Science 2022-01-28 Christopher Tran , Elena Zheleva