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Contrary to many recent models of growing networks, we present a model with fixed number of nodes and links, where it is introduced a dynamics favoring the formation of links between nodes with degree of connectivity as different as…

Statistical Mechanics · Physics 2007-05-23 M. Baiesi , S. S. Manna

The properties of certain networks are determined by hidden variables that are not explicitly measured. The conditional probability (propagator) that a vertex with a given value of the hidden variable is connected to k of other vertices…

Quantitative Methods · Quantitative Biology 2009-11-13 Gerald A. Miller , Yi Y. Shi , Hong Qian , Karol Bomsztyk

We study the growth of a directed network, in which the growth is constrained by the cost of adding links to the existing nodes. We propose a new preferential-attachment scheme, in which a new node attaches to an existing node i with…

Statistical Mechanics · Physics 2007-05-23 Volkan Sevim , Per Arne Rikvold

We propose a natural model of evolving weighted networks in which new links are not necessarily connected to new nodes. The model allows a newly added link to connect directly two nodes already present in the network. This is plausible in…

Physics and Society · Physics 2011-08-18 Shinji Tanimoto

In several real-world networks like the Internet, WWW etc., the number of links grow in time in a non-linear fashion. We consider growing networks in which the number of outgoing links is a non-linear function of time but new links between…

Statistical Mechanics · Physics 2009-11-10 Parongama Sen

We study a general set of models of social network evolution and dynamics. The models consist of both a dynamics on the network and evolution of the network. Links are formed preferentially between 'similar' nodes, where the similarity is…

Physics and Society · Physics 2009-11-11 George C. M. A. Ehrhardt , Matteo Marsili , Fernando Vega-Redondo

Networks are often characterized by node heterogeneity for which nodes exhibit different degrees of interaction and link homophily for which nodes sharing common features tend to associate with each other. In this paper, we propose a new…

Methodology · Statistics 2018-03-13 Ting Yan , Binyan Jiang , Stephen E. Fienberg , Chenlei Leng

The degree distributions of complex networks are usually considered to be power law. However, it is not the case for a large number of them. We thus propose a new model able to build random growing networks with (almost) any wanted degree…

Social and Information Networks · Computer Science 2020-12-08 Thibaud Trolliet , Frédéric Giroire , Stéphane Pérennes

Molecular networks guide the biochemistry of a living cell on multiple levels: its metabolic and signalling pathways are shaped by the network of interacting proteins, whose production, in turn, is controlled by the genetic regulatory…

Soft Condensed Matter · Physics 2009-11-07 Sergei Maslov , Kim Sneppen

There are diverse mechanisms driving the evolution of social networks. A key open question dealing with understanding their evolution is: How various preferential linking mechanisms produce networks with different features? In this paper we…

Physics and Society · Physics 2015-06-12 Haibo Hu , Jinli Guo , Xuan Liu

Protein-Protein Interaction Networks aim to model the interactome, providing a powerful tool for understanding the complex relationships governing cellular processes. These networks have numerous applications, including functional…

Molecular Networks · Quantitative Biology 2023-10-05 Rodrigo Henrique Ramos , Cynthia de Oliveira Lage Ferreira , Adenilso Simao

We investigate a network model based on an infinite regular square lattice embedded in the Euclidean plane where the node connection probability is given by the geometrical distance of nodes. We show that the degree distribution in the…

Physics and Society · Physics 2008-06-23 Matus Medo , Jan Smrek

Models of complex networks often incorporate node-intrinsic properties abstracted as hidden variables. The probability of connections in the network is then a function of these variables. Real-world networks evolve over time, and many…

Physics and Society · Physics 2021-05-19 Harrison Hartle , Fragkiskos Papadopoulos , Dmitri Krioukov

This paper presents an approach to the modeling of degree-degree correlation in complex networks. Thus, a simple function, \Delta(k', k), describing specific degree-to- degree correlations is considered. The function is well suited to…

Physics and Society · Physics 2015-06-17 Alfonso Niño , Camelia Muñoz-Caro

The network paradigm is increasingly used to describe the topology and dynamics of complex systems. Here we review the results of the topological analysis of protein structures as molecular networks describing their small-world character,…

Biomolecules · Quantitative Biology 2007-06-10 Csaba Bode , Istvan A. Kovacs , Mate S. Szalay , Robin Palotai , Tamas Korcsmaros , Peter Csermely

Inspired by scientific collaboration networks, especially our empirical analysis of the network of econophysicists, an evolutionary model for weighted networks is proposed. Both degree-driven and weight-driven models are considered.…

Disordered Systems and Neural Networks · Physics 2007-05-23 Menghui Li , Jinshan Wu , Dahui Wang , Tao Zhou , Zengru Di , Ying Fan

Random graphs are more and more used for modeling real world networks such as evolutionary networks of proteins. For this purpose we look at two different models and analyze how properties like connectedness and degree distributions are…

Probability · Mathematics 2019-02-05 Klemens Taglieber , Uta Freiberg

Collaboration networks provide a method for examining the highly heterogeneous structure of collaborative communities. However, we still have limited theoretical understanding of how individual heterogeneity relates to network…

Physics and Society · Physics 2016-07-27 Katharine A. Anderson

This article describes a gradient complex network model whose weights are proportional to the difference between uniformly distributed ``fitness'' values assigned to the nodes. It is shown analytically and experimentally that the strength…

Disordered Systems and Neural Networks · Physics 2007-05-23 Luciano da Fontoura Costa

Are biological networks different from other large complex networks? Both large biological and non-biological networks exhibit power-law graphs (number of nodes with degree k, N(k) ~ k-b) yet the exponents, b, fall into different ranges.…

Condensed Matter · Physics 2007-05-23 Fan Chung , Linyuan Lu , T. Gregory Dewey , David J. Galas