Related papers: Falling chains
We characterize the particle transport, particle loss, and nonequilibrium steady states in a dissipative one-dimensional lattice connected to reservoirs at both ends. The free-fermion reservoirs are fixed at different chemical potentials,…
Conserved quantities are obtained and analyzed in the new models with global scale invariance recently proposed. Such models allow for non tivial scalar field potentials and masses for particles, so that the scale symmetry must be broken…
A partially hinged, partially free rectangular plate is considered, with the aim to address the possible unstable end behaviors of a suspension bridge subject to wind. This leads to a nonlinear plate evolution equation with a nonlocal…
The onset of distortion in one-dimensional monatomic chains with partially filled valence bands is considered to be well-established by the Peierls theorem, which associates the distortion with the formation of a band gap and a subsequent…
We systematically examine all possible Gauss laws obeying spatial rotation symmetry, characterising the corresponding conserved charges. In the case of conserved higher moments, this gives rise to fractonic behaviour. We show that many…
The processes by which protein sidechains reach equilibrium during a folding reaction are investigated using both lattice and all-atom simulations. We find that rates of sidechain relaxation exhibit a distribution over the protein…
We investigate the folding and forced-unbinding transitions of adsorbed semiflexible polymer chains using theory and simulations. These processes describe biologically relevant phenomena that include adhesive interactions between proteins…
The freely jointed chain model with reversible hinges (rFJC) is the simplest theoretical model that captures reversible transitions of the local bending stiffness along the polymer chain backbone, e.g. helix-coil-type of local…
We study two popular one-dimensional chains of classical anharmonic oscillators: the rotor chain and a version of the discrete non-linear Schr\"odinger chain. We assume that the interaction between neighboring oscillators, controlled by the…
The confinement of elementary excitations induces distinctive features in the non-equilibrium quench dynamics. One of the most remarkable is the suppression of entanglement entropy which in several instances turns out to oscillate rather…
We employ simulations of model proteins to study folding on rugged energy landscapes. We construct ``first-passage'' networks as the system transitions from unfolded to native states. The nodes and bonds in these networks correspond to…
A polymer chain pinned in space exerts a fluctuating force on the pin point in thermal equilibrium. The average of such fluctuating force is well understood from statistical mechanics as an entropic force, but little is known about the…
In a four-dimensional space I shall construct all of the conformally invariant, scalar-vector-tensor field theories that are consistent with conservation of charge, and flat space compatible. By the last assumption I mean that the…
Single-loop elastic rings can be folded into multi-loop equilibrium configurations. In this paper, the stability of several such multi-loop states which are either circular or straight are investigated analytically and illustrated by…
The elastic response is studied of a single flexible chain grafted on a rigid plane and an ensemble of non-interacting tethered chains. It is demonstrated that the entropic theory of rubber elasticity leads to conclusions that disagree with…
When a flexible polymer is sucked into a localized small hole, the chain can initially respond only locally and the sequential nonequilibrium processes follow in line with the propagation of the tensile force along the chain backbone. We…
The study of the response of amorphous materials to oscillatory strain is traditionally performed with many repeated cycles. We argue that it pays to consider carefully just one cycle (and may be a second), to reveal the rich physics that…
We analyse the nature of the confinement of an infinitely long (and finite) linear semiflexible homo-polymer chain confined in between two geometrical constraints (A&B) under good solvent condition in two dimensions. The constraints are…
We study the dynamics of an heteropolymeric chain relaxing toward a new equilibrium configuration after the action of an external perturbation. We compare the results from Monte Carlo simulations with the results of a Langevin normal mode…
The longitudinal response of single semiflexible polymers to sudden changes in externally applied forces is known to be controlled by the propagation and relaxation of backbone tension. Under many experimental circumstances, realized, e.g.,…