Related papers: Topological Quantum Computation and Error Correcti…
Biological cells are able to generate intricate structures and respond to external stimuli, sculpting their membrane from within. Simplified biomimetic systems can aid in understanding the principles which govern these shape changes and…
Quantized dynamics is essential for natural processes and technological applications alike. The work of Thouless on quantized particle transport in slowly varying potentials (Thouless pumping) has played a key role in understanding that…
Stochastic thermodynamics provides a useful set of tools to analyze and constrain the behavior of far from equilibrium systems. In this paper, we report an application of ideas from stochastic thermodynamics to the problem of membrane…
Active biological flow networks pervade nature and span a wide range of scales, from arterial blood vessels and bronchial mucus transport in humans to bacterial flow through porous media or plasmodial shuttle streaming in slime molds.…
Nonequilibrium quantum field theory is often used to derive an approximation for the evolution of number densities and asymmetries in astroparticle models when a more precise treatment of quantum thermal effects is required. This work…
Collective guidance of out-of-equilibrium systems without using external fields is a challenge of paramount importance in active matter, ranging from bacterial colonies to swarms of self-propelled particles. Designing strategies to guide…
The reproduction of a living cell requires a repeatable set of chemical events to be properly coordinated. Such events define a replication cycle, coupling the growth and shape change of the cell membrane with internal metabolic reactions.…
A fault-tolerant quantum computation requires an efficient means to detect and correct errors that accumulate in encoded quantum information. In the context of machine learning, neural networks are a promising new approach to quantum error…
The flow matching has rapidly become a dominant paradigm in classical generative modeling, offering an efficient way to interpolate between two complex distributions. We extend this idea to the quantum realm and introduce the Quantum Flow…
We study the nonequilibrium dynamics leading to the formation of topological defects in a symmetry-breaking phase transition of a quantum scalar field with \lambda\Phi^4 self-interaction in a spatially flat, radiation-dominated…
Atmospheric flows exhibit selfsimilar fluctuations on all scales(space-time) ranging from climate(kilometers/years) to turbulence(millimeters/seconds) manifested as fractal geometry to the global cloud cover pattern concomitant with inverse…
Modeling the dynamical flows on networks of biomolecular machines often entails computing node populations and edge fluxes with Master Equations and correlating machine performance with entropy production. But this alone is not sufficient…
Neural networks possess formidable representational power, rendering them invaluable in solving complex quantum many-body systems. While they excel at analyzing static solutions, nonequilibrium processes, including critical dynamics during…
We report the quantum computing of reacting flows by simulating the Hamiltonian dynamics. The scalar transport equation for reacting flows is transformed into a Hamiltonian system, mapping the dissipative and non-Hermitian problem in…
Morphological change of bilayer membrane in vivo is not a spontaneous procedure but modulated by various types of proteins in general. Most of these modulations are associated with the localization of related proteins in the crowded lipid…
We derive for Bohmian mechanics topological factors for quantum systems with a multiply-connected configuration space Q. These include nonabelian factors corresponding to what we call holonomy-twisted representations of the fundamental…
We provide a non-equilibrium thermodynamic description of the life-cycle of a droplet based, chemically feasible, system of protocells. By coupling the protocells metabolic kinetics with its thermodynamics, we demonstrate how the system can…
We examine the quantum coherence properties of tubulin heterodimers arranged into the protofilaments of cytoskeletal microtubules. In the physical model proposed by the authors, the microtubule interiors are treated as high-Q quantum…
Topological effects manifest in a wide range of physical systems, such as solid crystals, acoustic waves, photonic materials and cold atoms. These effects are characterized by `topological invariants' which are typically integer-valued, and…
Cells use homeostatic mechanisms to maintain an optimal composition of distinct types of phospholipids in cellular membranes. The hydrophilic dipolar layer at the membrane interface, composed of phospholipid headgroups, regulates the…