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In the past the study of reaction-diffusion systems has greatly contributed to our understanding of the behavior of many-body systems far from equilibrium. In this paper we aim at characterizing the properties of diffusion limited reactions…

Statistical Mechanics · Physics 2015-05-14 Sven Dorosz , Michel Pleimling

We address the dynamics of damped collective modes in terms of first and second moments. The modes are introduced in a self-consistent fashion with the help of a suitable application of linear response theory. Quantum effects in the…

Nuclear Theory · Physics 2015-06-26 H. Hofmann , D. Kiderlen

Analytical equations were found for interdigitated electrodes, which considered reversible electrode reactions and pure diffusion within confined spaces. A conformal transformation, obtained by the use of Jacobian elliptic functions, was…

Chemical Physics · Physics 2019-03-08 Cristian F. Guajardo Yévenes , Werasak Surareungchai

We study a reaction-diffusion process that involves two species of atoms, immobile and diffusing. We assume that initially only immobile atoms, uniformly distributed throughout the entire space, are present. Diffusing atoms are injected at…

Statistical Mechanics · Physics 2014-07-18 P. L. Krapivsky

In this paper, we study the convergence to the stable equilibrium for Kuramoto oscillators. Specifically, we derive estimates on the rate of convergence to the global equilibrium for solutions of the Kuramoto-Sakaguchi equation in a large…

Analysis of PDEs · Mathematics 2024-06-21 Javier Morales , David Poyato

We present a generalization of the Kuramoto phase oscillator model in which phases advance in discrete phase increments through Poisson processes, rendering both intrinsic oscillations and coupling inherently stochastic. We study the…

Adaptation and Self-Organizing Systems · Physics 2017-09-04 David J Jörg

Convection-diffusion-reaction equations are a class of second-order partial differential equations widely used to model phenomena involving the change of concentration/population of one or more substances/species distributed in space.…

Numerical Analysis · Mathematics 2024-10-16 Rasha Al Jahdali , David C. Del Rey Fernandez , Lisandro Dalcin , Matteo Parsani

The self-consistent method, first introduced by Kuramoto, is a powerful tool for the analysis of the steady states of coupled oscillator networks. For second-order oscillator networks complications to the application of the self-consistent…

Adaptation and Self-Organizing Systems · Physics 2018-10-08 Jian Gao , Konstantinos Efstathiou

The propagating chemical fronts found in cubic autocatalytic reaction-diffusion processes are studied. Simulations of the reaction-diffusion equation near to and far from the onset of the front instability are performed and the structure…

chao-dyn · Physics 2009-10-28 Anatoly Malevanets , Agusti Careta , Raymond Kapral

Many approaches to modelling reaction-diffusion systems with anomalous transport rely on deterministic equations and ignore fluctuations arising due to finite particle numbers. Starting from an individual-based model we use a…

Statistical Mechanics · Physics 2019-05-29 Joseph W. Baron , Tobias Galla

The use of dissipation for the controlled creation of nontrivial quantum many-body correlated states is of much fundamental and practical interest. What is the result of imposing number conservation, which, in closed system, gives rise to…

Statistical Mechanics · Physics 2023-05-30 P. A. Nosov , D. S. Shapiro , M. Goldstein , I. S. Burmistrov

We consider a recently introduced $D$-dimensional generalized Kuramoto model for many $(N\gg 1)$ interacting agents in which the agent states are $D$-dimensional unit vectors. It was previously shown that, for even $D$, similar to the…

Adaptation and Self-Organizing Systems · Physics 2019-03-27 Sarthak Chandra , Edward Ott

Dynamical systems theory provides powerful methods to extract effective macroscopic dynamics from complex systems with slow modes and fast modes. Here we derive and theoretically support a macroscopic, spatially discrete, model for a class…

Analysis of PDEs · Mathematics 2010-03-12 Wei Wang , A. J. Roberts

This work focuses on stability of regime-switching diffusions consisting of continuous and discrete components, in which the discrete component switches in a countably infinite set and its switching rates at current time depend on the…

Probability · Mathematics 2017-10-10 Dang H. Nguyen , George Yin

Prolongating our previous paper on the Einstein relation, we study the motion of a particle diffusing in a random reversible environment when subject to a small external forcing. In order to describe the long time behavior of the particle,…

Probability · Mathematics 2018-06-25 Pierre Mathieu , Andrey Piatnitski

Motivated by bacterial chemotaxis and multi-species ecological interactions in heterogeneous environments, we study a general one-dimensional reaction-cross-diffusion system in the presence of spatial heterogeneity in both transport and…

Pattern Formation and Solitons · Physics 2023-03-08 Eamonn A. Gaffney , Andrew L. Krause , Philip K. Maini , Chenyuan Wang

We present a novel method to compute the phase space distribution in the nonequilibrium stationary state of a wide class of mean-field systems involving rotators subject to quenched disordered external drive and dissipation. The method…

Statistical Mechanics · Physics 2015-06-11 Alessandro Campa , Shamik Gupta , Stefano Ruffo

Chemical reactions inside cells are generally considered to happen within fixed-size compartments. Needless to say, cells and their compartments are highly dynamic. Thus, such stringent assumptions may not reflect biochemical reality, and…

Quantitative Methods · Quantitative Biology 2016-02-17 Atiyo Ghosh , Tatiana T. Marquez-Lago

Reaction diffusion systems with Turing instability and mass conservation are studied. In such systems, abrupt decays of stripes follow quasi-stationary states in sequence. At steady state, the distance between stripes is much longer than…

Pattern Formation and Solitons · Physics 2009-11-11 Shuji Ishihara , Mikiya Otsuji , Atsushi Mochizuki

It has recently been shown that structural conditions on the reaction network, rather than a 'fine-tuning' of system parameters, often suffice to impart 'absolute concentration robustness' on a wide class of biologically relevant,…

Probability · Mathematics 2014-01-20 David F. Anderson , German Enciso , Matthew Johnston