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We discuss the computational bottlenecks in molecular dynamics (MD) and describe the challenges in parallelizing the computation intensive tasks. We present a hybrid algorithm using MPI (Message Passing Interface) with OpenMP threads for…

Computational Physics · Physics 2015-07-28 Anirban Pal , Abhishek Agarwala , Soumyendu Raha , Baidurya Bhattacharya

Deep neural networks (DNNs) face significant challenges when deployed on resource-constrained extreme edge devices due to their computational and data-intensive nature. While standalone accelerators tailored for specific application…

Hardware Architecture · Computer Science 2024-11-22 Xiaoling Yi , Ryan Antonio , Joren Dumoulin , Jiacong Sun , Josse Van Delm , Guilherme Paim , Marian Verhelst

Massive Ultra-Reliable and Low-Latency Communications (mURLLC), which integrates URLLC with massive access, is emerging as a new and important service class in the next generation (6G) for time-sensitive traffics and has recently received…

Systems and Control · Electrical Eng. & Systems 2021-11-18 Yan Liu , Yansha Deng , Maged Elkashlan , Arumugam Nallanathan , George K. Karagiannidis

In this paper, we propose TAPA, an end-to-end framework that compiles a C++ task-parallel dataflow program into a high-frequency FPGA accelerator. Compared to existing solutions, TAPA has two major advantages. First, TAPA provides a set of…

Hardware Architecture · Computer Science 2024-10-18 Licheng Guo , Yuze Chi , Jason Lau , Linghao Song , Xingyu Tian , Moazin Khatti , Weikang Qiao , Jie Wang , Ecenur Ustun , Zhenman Fang , Zhiru Zhang , Jason Cong

GPU-aware collective communication has become a major bottleneck for modern computing platforms as GPU computing power rapidly rises. A traditional approach is to directly integrate lossy compression into GPU-aware collectives, which can…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-05-08 Jiajun Huang , Sheng Di , Xiaodong Yu , Yujia Zhai , Jinyang Liu , Yafan Huang , Ken Raffenetti , Hui Zhou , Kai Zhao , Xiaoyi Lu , Zizhong Chen , Franck Cappello , Yanfei Guo , Rajeev Thakur

In natural language processing (NLP), the "Transformer" architecture was proposed as the first transduction model replying entirely on self-attention mechanisms without using sequence-aligned recurrent neural networks (RNNs) or convolution,…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-07-20 Bingbing Li , Santosh Pandey , Haowen Fang , Yanjun Lyv , Ji Li , Jieyang Chen , Mimi Xie , Lipeng Wan , Hang Liu , Caiwen Ding

For the last three decades a core use of FPGAs has been for processing communication: FPGA-based SmartNICs are in widespread use from the datacenter to IoT. Augmenting switches with FPGAs, however, has been less studied, but has numerous…

Hardware Architecture · Computer Science 2025-02-03 Pouya Haghi , Anqi Guo , Tong Geng , Anthony Skjellum , Martin Herbordt

Since the development of the Beowulf project to build a parallel computer from commodity PC components, there have been many such clusters built. The MILC QCD code has been run on a variety of clusters and supercomputers. Key design…

High Energy Physics - Lattice · Physics 2009-10-31 Steven Gottlieb

Efficient medium access control (MAC) is critical for enabling low-latency and reliable communication in industrial Machine-to-Machine (M2M) net-works, where timely data delivery is essential for seamless operation. The presence of…

Signal Processing · Electrical Eng. & Systems 2025-10-24 Anwar Ahmed Khan , Indrakshi Dey

The Open Computing Cluster for Advanced data Manipulation (OCCAM) is a multi-purpose flexible HPC cluster designed and operated by a collaboration between the University of Torino and the Sezione di Torino of the Istituto Nazionale di…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-12-06 Marco Aldinucci , Stefano Bagnasco , Stefano Lusso , Paolo Pasteris , Sergio Rabellino , Sara Vallero

Cosmological simulations of structures and galaxies formations have played a fundamental role in the study of the origin, formation and evolution of the Universe. These studies improved enormously with the use of supercomputers and parallel…

Astrophysics · Physics 2010-11-11 U. Becciani , V. Antonuccio , M. Comparato

In this article, we present two different parallel Swendsen-Wang Cluster(SWC) algorithms using message-passing interface(MPI). One is based on Master-Slave Parallel Model(MSPM) and the other is based on Data-Parallel Model(DPM). A speedup…

Computational Physics · Physics 2008-08-18 Shizeng Lin , Bo Zheng

Scaling up Large Language Model(LLM) training involves fitting a tremendous amount of training parameters across a limited number of workers. However, methods like ZeRO-3 that drastically reduce GPU memory pressure often incur heavy…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-02-05 Lang Xu , Quentin Anthony , Jacob Hatef , Aamir Shafi , Hari Subramoni , Dhabaleswar K. , Panda

This paper considers a challenging scenario of machine type communications, where we assume internet of things (IoT) devices send short packets sporadically to an access point (AP) and the devices are not synchronized in the packet level.…

Information Theory · Computer Science 2024-06-12 Yuanyuan Zhang , Zhengdao Yuan , Qinghua Guo , Zhongyong Wang , Jiangtao Xi , Yanguang Yu , Yonghui Li

As it has been discussed in the first part of this work, the utilization of advanced multiple access protocols and the joint optimization of the communication and computing resources can facilitate the reduction of delay for wireless…

Information Theory · Computer Science 2021-04-27 Pavlos S. Bouzinis , Panagiotis D. Diamantoulakis , George K. Karagiannidis

Wasm is gaining popularity outside the Web as a well-specified low-level binary format with ISA portability, low memory footprint and polyglot targetability, enabling efficient in-process sandboxing of untrusted code. Despite these…

Operating Systems · Computer Science 2025-03-28 Arjun Ramesh , Tianshu Huang , Ben L. Titzer , Anthony Rowe

Application development for distributed computing "Grids" can benefit from tools that variously hide or enable application-level management of critical aspects of the heterogeneous environment. As part of an investigation of these issues,…

Distributed, Parallel, and Cluster Computing · Computer Science 2007-05-23 N. T. Karonis , B. Toonen , I. Foster

General matrix/matrix multiplication (GEMM) is crucial for scientific computing and machine learning. However, the increased scale of the computing platforms raises concerns about hardware and software reliability. In this poster, we…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-05-10 Shixun Wu , Yujia Zhai , Jiajun Huang , Zizhe Jian , Zizhong Chen

Message logging protocols are enablers of local rollback, a more efficient alternative to global rollback, for fault tolerant MPI applications. Until now, message logging MPI implementations have incurred the overheads of a redesign and…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-05-09 Kiril Dichev , Dimitrios S. Nikolopoulos

Compute Express Link (CXL) serves as a rising industry standard, delivering high-speed cache-coherent links to a variety of devices, including host CPUs, computational accelerators, and memory devices. It is designed to promote system…

Hardware Architecture · Computer Science 2024-11-14 Yuda An , Shushu Yi , Bo Mao , Qiao Li , Mingzhe Zhang , Ke Zhou , Nong Xiao , Guangyu Sun , Xiaolin Wang , Yingwei Luo , Jie Zhang