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Manipulating the superconducting states of high-T_c cuprate superconductors in an efficient and reliable way is of great importance for their applications in next-generation electronics. Traditional methods are mostly based on a…

Potassium channels play critical roles in many physiological processes, providing a selective permeation route for K+ ions in and out of a cell, by employing a carefully designed selectivity filter, evolutionarily conserved from viruses to…

Biological Physics · Physics 2021-04-16 Andrei Mironenko , Ulrich Zachariae , Bert L. de Groot , Wojciech Kopec

A hydrophobic constriction site can act as an efficient barrier to ion and water permeation if its diameter is less than the diameter of an ion's first hydration shell. This hydrophobic gating mechanism is thought to operate in a number of…

Subcellular Processes · Quantitative Biology 2007-05-23 Oliver Beckstein , Mark S. P. Sansom

In the present study, the ionic transport and selectivity of electrokinetically-driven flow of power-law fluids in a long pH-regulated rectangular nanochannel are analyzed. The electrical potential and momentum equations are numerically…

Fluid Dynamics · Physics 2021-11-09 Mohammad Ali Vakili , Morteza Sadeghi , Mohammad Hassan Saidi , Ali Moosavi

Quantum processors based on linear arrays of trapped ions have achieved exceptional performance, but scaling to large qubit numbers requires realizing two-dimensional ion arrays as envisioned in the quantum charge-coupled device (QCCD)…

Voltage-dependent ion channels determine the electric properties of axonal cell membranes. They not only allow the passage of ions through the cell membrane but also contribute to an additional charging of the cell membrane resulting in the…

Neurons and Cognition · Quantitative Biology 2009-11-13 G. Schmid , I. Goychuk , P. Hanggi

Ionic liquid gating has been used to modify properties of layered transition metal dichalcogenides (TMDCs), including two-dimensional (2D) crystals of TMDCs used extensively recently in the device work, which has led to observations of…

Materials Science · Physics 2018-10-26 Yueshen Wu , Hailong Lian , Jiaming He , Jinyu Liu , Shun Wang , Hui Xing , Zhiqiang Mao , Ying Liu

The conduction and selectivity of calcium/sodium ion channels are described in terms of ionic Coulomb blockade, a phenomenon based on charge discreteness and an electrostatic model of an ion channel. This novel approach provides a unified…

Biological Physics · Physics 2014-05-07 I. Kh. Kaufman , P. V. E. McClintock , R. S. Eisenberg

Potassium (K-) channels catalyze K+ ion permeation across cellular membranes while simultaneously discriminating their permeation over Na+ ions by more than a factor of a thousand. Structural studies show bare K+ ions occupying the…

Biological Physics · Physics 2009-11-13 Sameer Varma , Susan B. Rempe

The available sites for ions in a typical disordered ionic conductor are determined. For this purpose we devised a straightforward algorithm which via cluster analysis identifies these sites from long time ionic trajectories below the glass…

Condensed Matter · Physics 2009-11-10 Heiko Lammert , Magnus Kunow , Andreas Heuer

The transport properties of nanofluidic channels are usually studied under constant (DC) voltage or pressure driving. However, the frequency response under sinusoidal (AC) drivings offers rich insights into the time-dependent transport…

Mesoscale and Nanoscale Physics · Physics 2026-04-07 Baptiste Coquinot , Mathieu Lizée , Lydéric Bocquet , Nikita Kavokine

In this work we have theoretically investigated how the action potential generation and its associated intrinsic properties are affected in presence of ion channel blockers by adapting Gillepie's stochastic simulation technique on a very…

Biological Physics · Physics 2018-10-02 Krishnendu Pal , Gautam Gangopadhyay

An intense controversy has surrounded the mechanism of voltage-gating in ion channels. We interpreted the two leading models of voltage-gating with respect to the thermodynamic energetics of membrane insertion of the voltage-sensing…

Biomolecules · Quantitative Biology 2011-04-21 Ashok Palaniappan

We report an experimental study of the influences of the fixed charge and bulk ionic concentrations on the conduction of biological ion channels, and we consider the results within the framework of the ionic Coulomb blockade model of…

Subcellular Processes · Quantitative Biology 2016-12-09 I. Kh. Kaufman , O. A. Fedorenko , D. G. Luchinsky , W. A. T. Gibby , S. K. Roberts. P. V. E. McClintock , R. S. Eisenberg

The effect of fluctuations on the conductivity of ion channels is investigated. It is shown that modulation of the potential barrier at the selectivity site due to electrostatic amplification of charge fluctuations at the channel mouth…

Biological Physics · Physics 2009-11-13 D. G. Luchinsky , R. Tindjong , I. Kaufman , P. V. E. McClintock , R. S. Eisenberg

Guiding of highly charged ions (HCI) through tilted capillaries promises to develop into a tool to efficiently collimate and focus low-energy ion beams to sub-micrometer size. One control parameter to optimize guiding is the residual…

Other Condensed Matter · Physics 2011-09-20 G. Kowarik , R. J. Bereczky , F. Ladinig , D. Schrempf , C. Lemell , J. Burgdörfer , K. Tőkési , F. Aumayr

Ionic liquid gating can markedly modulate the materials' carrier density so as to induce metallization, superconductivity, and quantum phase transitions. One of the main issues is whether the mechanism of ionic liquid gating is an…

Ion channels form pores across the lipid bilayer, selectively allowing inorganic ions to cross the membrane down their electrochemical gradient. While the study of ion desolvation free-energies have attracted much attention, the role of…

Chemical Physics · Physics 2012-07-31 Diego Prada-Gracia , Francesco Rao

Electrostatic interaction between ions in an ionic channel and the charge fluctuations in the channel mouth are considered. It is shown that the charge fluctuations can be enhanced in the channels with low dielectric constant and result in…

Biological Physics · Physics 2007-05-23 D. G. Luchinsky , R. Tindjong , I. Kaufman , P. V. E. McClintock , R. S. Eisenberg

We use Brownian dynamics simulations to study the permeation properties of a generic electrostatic model of a biological ion channel as a function of the fixed charge $Q_f$ at its selectivity filter. We reconcile the recently-discovered…

Biological Physics · Physics 2013-12-05 I. Kaufman , D. G. Luchinsky , R. Tindjong , P. V. E. McClintock , R. S. Eisenberg