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The transfer learning toolkit wraps the codes of 17 transfer learning models and provides integrated interfaces, allowing users to use those models by calling a simple function. It is easy for primary researchers to use this toolkit and to…

Machine Learning · Computer Science 2019-11-21 Fuzhen Zhuang , Keyu Duan , Tongjia Guo , Yongchun Zhu , Dongbo Xi , Zhiyuan Qi , Qing He

We introduce torchbearer, a model fitting library for pytorch aimed at researchers working on deep learning or differentiable programming. The torchbearer library provides a high level metric and callback API that can be used for a wide…

Machine Learning · Computer Science 2018-09-11 Ethan Harris , Matthew Painter , Jonathon Hare

A tutorial-style introduction to the R-package robFitConGraph is given. The latter provides a robust goodness-of-fit test for Gaussian graphical models. Its use is demonstrated at a data example on music performance anxiety, which also…

Methodology · Statistics 2022-12-02 Daniel Vogel , Stuart J. Watt , Anna Wiedemann

BioNetFit is a software tool designed for solving parameter identification problems that arise in the development of rule-based models. It solves these problems through curve fitting (i.e., nonlinear regression). BioNetFit is compatible…

Cyanure is an open-source C++ software package with a Python interface. The goal of Cyanure is to provide state-of-the-art solvers for learning linear models, based on stochastic variance-reduced stochastic optimization with acceleration…

Machine Learning · Statistics 2019-12-23 Julien Mairal

A common problem in particle physics is the requirement to reproduce comparisons between data and theory when the theory is a (general purpose) Monte Carlo simulation and the data are measurements of final state observables in high energy…

High Energy Physics - Phenomenology · Physics 2007-05-23 B. M. Waugh , H. Jung , A. Buckley , L. Lonnblad , J. M. Butterworth

The progression of scientific computing resources has enabled the numerical approximation of mathematical models describing complex physical phenomena. A significant portion of researcher time is typically dedicated to the development of…

Mathematical Software · Computer Science 2015-06-22 Paul T. Bauman , Roy H. Stogner

forqs is a forward-in-time simulation of recombination, quantitative traits, and selection. It was designed to investigate haplotype patterns resulting from scenarios where substantial evolutionary change has taken place in a small number…

Populations and Evolution · Quantitative Biology 2013-10-14 Darren Kessner , John Novembre

We present the Quantum Hamiltonian Analysis Toolkit (QHAT), a newly developed application that provides a user-friendly interface for studying Hamiltonians and performing Hamiltonian simulation on fault-tolerant quantum computers. QHAT…

The Rapid Iterative FiTting (RIFT) parameter inference algorithm provides a simulation-based inference approach to efficient, highly-parallelized parameter inference for GW sources. Previous editions of RIFT have conservatively optimized…

Instrumentation and Methods for Astrophysics · Physics 2025-05-20 Katelyn J. Wagner , R. O'Shaughnessy , A. Yelikar , N. Manning , D. Fernando , J. Lange , V. Tiwari , A. Fernando , D. Williams

Force matching is an established technique to generate effective potentials for molecular dynamics simulations from first-principles data. This method has been implemented in the open source code potfit. Here, we present a review of the…

With the advancement of deep learning technology, neural networks have demonstrated their excellent ability to provide accurate predictions in many tasks. However, a lack of consideration for neural network calibration will not gain trust…

Machine Learning · Computer Science 2022-11-30 Lei Hsiung , Yung-Chen Tang , Pin-Yu Chen , Tsung-Yi Ho

This paper introduces a library of algorithms for representing cloud microphysics in numerical models. The library is written in C++, hence the name libcloudph++. In the current release, the library covers three warm-rain schemes: the…

Atmospheric and Oceanic Physics · Physics 2017-09-12 Sylwester Arabas , Anna Jaruga , Hanna Pawlowska , Wojciech W. Grabowski

OpenGM is a C++ template library for defining discrete graphical models and performing inference on these models, using a wide range of state-of-the-art algorithms. No restrictions are imposed on the factor graph to allow for higher-order…

Artificial Intelligence · Computer Science 2012-06-04 Bjoern Andres , Thorsten Beier , Joerg H. Kappes

This paper describes a modular framework for the description of electroweak scattering and decay processes, including but not limited to Z-resonance physics. The framework consistently combines a complex-pole expansion near a s-channel…

High Energy Physics - Phenomenology · Physics 2023-10-12 Lisong Chen , Ayres Freitas

The automated repair of C++ compilation errors presents a significant challenge, the resolution of which is critical for developer productivity. Progress in this domain is constrained by two primary factors: the scarcity of large-scale,…

Artificial Intelligence · Computer Science 2025-09-22 Weixuan Sun , Jucai Zhai , Dengfeng Liu , Xin Zhang , Xiaojun Wu , Qiaobo Hao , AIMgroup , Yang Fang , Jiuyang Tang

Most education and workplace learning takes place in classroom contexts far removed from laboratories or field sites with special arrangements for scientific research. But digital online resources provide a novel opportunity for large scale…

Computers and Society · Computer Science 2015-02-17 Joseph Jay Williams , Juho Kim , Brian C. Keegan

We present MIST, the Molecular Integration Simulation Toolkit, a lightweight and efficient software library written in C++ which provides an abstract in- terface to common molecular dynamics codes, enabling rapid and portable development of…

Merlin++ is a C++ charged-particle tracking library developed for the simulation and analysis of complex beam dynamics within high energy particle accelerators. Accurate simulation and analysis of particle dynamics is an essential part of…

We introduce cilantro, an open-source C++ library for geometric and general-purpose point cloud data processing. The library provides functionality that covers low-level point cloud operations, spatial reasoning, various methods for point…

Computer Vision and Pattern Recognition · Computer Science 2018-11-19 Konstantinos Zampogiannis , Cornelia Fermuller , Yiannis Aloimonos
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