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Related papers: Growth Velocities of Branched Actin Networks

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In this work, we study in detail the distribution of stochastic forces generated by the molecular motors activity, in the actin cortex of pre-muscular cells. By combining active and passive rheology experiments, performed on the same…

Biological Physics · Physics 2019-12-10 P. Bohec , J. Tailleur , F. van Wijland , A. Richert , F. Gallet

Networks describing the interaction of the elements that constitute a complex system grow and develop via a number of different mechanisms, such as the addition and deletion of nodes, the addition and deletion of edges, as well as the…

Molecular Networks · Quantitative Biology 2010-06-09 Arend Hintze , Christoph Adami

Pattern formation and the mechanics of a mixture of actin filaments and myosin motors that is confined by a rigid membrane is investigated. By using a coarse-grained molecular dynamics model, we demonstrate that the competition between the…

Soft Condensed Matter · Physics 2023-04-12 Mitsusuke Tarama , Tatsuo Shibata

During development, the mammalian brain differentiates into specialized regions with distinct functional abilities. While many factors contribute to functional specialization, we explore the effect of neuronal density on the development of…

Neurons and Cognition · Quantitative Biology 2010-04-14 Michael I. Ham , Vadas Gintautas , Marko A. Rodriguez , Ryan A. Bennett , Cara L. Santa Maria , Luis M. A. Bettencourt

A version of ``preferential attachment'' random graphs, corresponding to linear ``weights'' with random ``edge additions,'' which generalizes some previously considered models, is studied. This graph model is embedded in a continuous-time…

Probability · Mathematics 2007-05-23 K. B. Athreya , A. P. Ghosh , S. Sethuraman

Depletion interactions are thought to significantly contribute to the organization of intracellular structures in the crowded cytosol. The strength of depletion interactions depends on physical parameters like the depletant number density…

The formation of neuron networks is a process of fundamental importance for understanding the development of the nervous system and for creating biomimetic devices for tissue engineering and neural repair. The basic process that controls…

Cell Behavior · Quantitative Biology 2022-05-16 Ilya Yurchenko , Matthew Farwell , Donovan D. Brady , Cristian Staii

We present a general model for the growth of weighted networks in which the structural growth is coupled with the edges' weight dynamical evolution. The model is based on a simple weight-driven dynamics and a weights' reinforcement…

Statistical Mechanics · Physics 2009-11-10 Alain Barrat , Marc Barthelemy , Alessandro Vespignani

Interface energy and kinetic coefficient of crystal growth strongly depend on the face of the crystalline lattice. To investigate the kinetic anisotropy and velocity of different crystallographic faces we use the hyperbolic (modified) phase…

Materials Science · Physics 2020-04-03 Vladimir Ankudinov , Peter K. Galenko

Migratory and tissue resident cells exhibit highly branched morphologies to perform their function and to adapt to the microenvironment. Immune cells, for example, display transient branched shapes while exploring the surrounding tissues.…

Biological Physics · Physics 2024-04-02 Jiayi Liu , Javier Boix-Campos , Jonathan E. Ron , Johan M. Kux , Nir S. Gov , Pablo J. Sáez

In biological systems, the growth of cells, tissues, and organs is influenced by mechanical cues. Locally, cell growth leads to a mechanically heterogeneous environment as cells pull and push their neighbors in a cell network. Despite this…

Biological Physics · Physics 2021-03-17 Alexander Erlich , Gareth W. Jones , Françoise Tisseur , Derek E. Moulton , Alain Goriely

Conventional studies of network growth models mainly look at the steady state degree distribution of the graph. Often long time behavior is considered, hence the initial condition is ignored. In this contribution, the time evolution of the…

Physics and Society · Physics 2013-05-10 Babak Fotouhi , Michael Rabbat

We study the stochastic dynamics of growth and shrinkage of single actin filaments taking into account insertion, removal, and ATP hydrolysis of subunits either according to the vectorial mechanism or to the random mechanism. In a previous…

Biomolecules · Quantitative Biology 2015-05-13 Padinhateeri Ranjith , Kirone Mallick , Jean-Francois Joanny , David Lacoste

To quantify the mechanism of a complex network growth we focus on the network of citations of scientific papers and use a combination of the theoretical and experimental tools to uncover microscopic details of this network growth. Namely,…

Digital Libraries · Computer Science 2017-02-08 M. Golosovsky , S. Solomon

A catalytic branching random walk on a multidimensional lattice, with arbitrary finite number of catalysts, is studied in supercritical regime. The dynamics of spatial spread of the particles population is examined, upon normalization. The…

Probability · Mathematics 2020-07-14 Ekaterina Vl. Bulinskaya

Tip-driven growth processes underlie the development of many plants. To date, tip-driven growth processes have been modelled as an elongating path or series of segments without taking into account lateral expansion during elongation.…

Biological Physics · Physics 2014-01-24 Alexander Bucksch , Greg Turk , Joshua S. Weitz

A dynamic model for a random network evolving in continuous time is defined where new vertices are born and existing vertices may die. The fitness of a vertex is defined as the accumulated in-degree of the vertex and a new vertex is…

Probability · Mathematics 2015-09-24 Maria Deijfen

In this work, a growing network model that can generate a random network with finite degree in infinite time is studied. The dynamics are governed by a rule where the degree increases under a scheme similar to the Malthus-Verhulst model in…

Physics and Society · Physics 2016-05-09 M. O. Hase , H. L. Casa Grande

Inspired by recent experimental observation of patterning at the membrane of a living cell, we propose a generic model for the dynamics of a fluctuating interface driven by particle-like inclusions which stimulate its growth. We find that…

Soft Condensed Matter · Physics 2019-07-25 F. Cagnetta , M. R. Evans , D. Marenduzzo

Mechanical cues like the rigidity of the substrate are main determinants for the decision making of adherent cells. Here we use a mechano-chemical model to predict the cellular response to varying substrate stiffness. The model equations…

Cell Behavior · Quantitative Biology 2010-07-08 A. Besser , U. S. Schwarz
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