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Population dynamics reflects an underlying birth-death process, where the rates associated with different events may depend on external environmental conditions and on the population density. A whole family of simple and popular…

Populations and Evolution · Quantitative Biology 2019-07-03 Yitzhak Yahalom , Bnaya Steinmetz , Nadav M. Shnerb

Standard evolutionary theories of aging and mortality, implicitly based on assumptions of spatial averaging, hold that natural selection cannot favor shorter lifespan without direct compensating benefit to individual reproductive success.…

Populations and Evolution · Quantitative Biology 2015-06-15 Justin Werfel , Donald E. Ingber , Yaneer Bar-Yam

We propose the following model for speciation and extinction. Birth and deaths occur according to spatially inhomogeneous contact rates. We assume that the ratio of the birth rate over the death rate at a site converges to some limit as the…

Probability · Mathematics 2015-06-15 Rinaldo B. Schinazi

We consider a model for Darwinian evolution in an asexual population with a large but non-constant populations size characterized by a natural birth rate, a logistic death rate modelling competition and a probability of mutation at each…

Probability · Mathematics 2015-08-28 Martina Baar , Anton Bovier , Nicolas Champagnat

The magnitude and variability of Earth's biodiversity have puzzled scientists ever since paleontologic fossil databases became available. We identify and study a model of interdependent species where both endogenous and exogenous impacts…

Populations and Evolution · Quantitative Biology 2014-10-10 Frank Stollmeier , Theo Geisel , Jan Nagler

The Verhulst model is probably the best known macroscopic rate equation in population ecology. It depends on two parameters, the intrinsic growth rate and the carrying capacity. These parameters can be estimated for different populations…

Populations and Evolution · Quantitative Biology 2015-06-19 Vicenç Méndez , Michael Assaf , Daniel Campos , Werner Horsthemke

Models of population growth and extinction are an increasingly popular subject of study. However, consequences of stochasticity and noise in shaping distributions and outcomes are not sufficiently explored. Here we consider a distributed…

Statistical Mechanics · Physics 2020-11-11 Bertrand Ottino-Löffler , Mehran Kardar

Traditionally, population models distinguish individuals on the basis of their current state. Given a distribution, a discrete time model then specifies (precisely in deterministic models, probabilistically in stochastic models) the…

Populations and Evolution · Quantitative Biology 2023-09-21 B. Boldin , O. Diekmann , J. A. J. Metz

The two major approaches to studying macroevolution in deep time are the fossil record and reconstructed relationships among extant taxa from molecular data. Results based on one approach sometimes conflict with those based on the other,…

Populations and Evolution · Quantitative Biology 2018-04-02 Melanie J. Hopkins , David W. Bapst , Carl Simpson , Rachel C. M. Warnock

Understanding the conditions ensuring the persistence of a population is an issue of primary importance in population biology. The first theoretical approach to the problem dates back to the 50's with the KiSS (after Kierstead, Slobodkin…

Populations and Evolution · Quantitative Biology 2015-09-07 Stefano Berti , Massimo Cencini , Davide Vergni , Angelo Vulpiani

Time series of cell size evolution in unicellular marine algae (division Haptophyta; Coccolithus lineage), covering 57 million years, are studied by a system of linear stochastic differential equations of hierarchical structure. The data…

Applications · Statistics 2013-01-09 Trond Reitan , Tore Schweder , Jorijntje Henderiks

The transmission of monkeypox is studied using a stochastic model taking into account the biological aspects, the contact mechanisms and the demographic factors together with the intrinsic uncertainties. Our results provide insight into the…

Dynamical Systems · Mathematics 2024-07-09 Ghaus ur Rahman , Olena Tymoshenko , Giulia Di Nunno

We are interested in modeling some two-level population dynamics, resulting from the interplay of ecological interactions and phenotypic variation of individuals (or hosts) and the evolution of cells (or parasites) of two types living in…

Probability · Mathematics 2011-01-21 Sylvie Méléard , Sylvie Roelly

We consider excursions for a class of stochastic processes describing a population of discrete individuals experiencing density-limited growth, such that the population has a finite carrying capacity and behaves qualitatively like the…

Populations and Evolution · Quantitative Biology 2017-04-10 Todd L. Parsons

The Sole-Manrubia model of ``macro''-evolution describes the origination, evolution and extinction of species on geological time scales. We report some properties of this model which provide deep insight into this simple model which…

Statistical Mechanics · Physics 2009-11-07 Debashish Chowdhury , Dietrich Stauffer

A discrete time branching process where the offspring distribution is generation-dependent, and the number of reproductive individuals is controlled by a random mechanism is considered. This model is a Markov chain but, in general, the…

Probability · Mathematics 2024-01-30 Miguel González , Carmen Minuesa , Manuel Mota , Inés del Puerto , Alfonso Ramos

Two mathematical models of macroevolution are studied. These models have population dynamics at the species level, and mutations and extinction of species are also included. The population dynamics are updated by difference equations with…

Populations and Evolution · Quantitative Biology 2014-04-16 Yohsuke Murase , Takashi Shimada , Nobuyasu Ito , Per Arne Rikvold

We examine a lattice model of tumor growth where survival of tumor cells depends on the supplied nutrients. When such a supply is random, the extinction of tumors belongs to the directed percolation universality class. However, when the…

Statistical Mechanics · Physics 2015-05-30 Antonio Luis Ferreira , Dorota Lipowska , Adam Lipowski

In this paper, we consider a stochastic ratio-dependent predator-prey model. We firstly prove the existence, uniqueness and positivity of the solutions. Then, the boundedness of moments of population are studied. Finally, we show the…

Probability · Mathematics 2015-09-01 Nguyen Thi Hoai Linh , Ta Viet Ton

Multiple species in the ecosystem are believed to compete cyclically for survival and thus maintain balance in nature. Stochasticity has also an inevitable role in this dynamics. Considering these attributes of nature, the stochastic…

Populations and Evolution · Quantitative Biology 2020-08-05 Sirshendu Bhattacharyya , Pritam Sinha , Rina De , Chittaranjan Hens