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Stochastic kinetic models are often used to describe complex biological processes. Typically these models are analytically intractable and have unknown parameters which need to be estimated from observed data. Ideally we would have…

Computation · Statistics 2018-03-13 Richard J. Boys , Holly F. Ainsworth , Colin S. Gillespie

We review the derivation of the Kac master equation model for random collisions of particles, its relationship to the Poisson process, and existing algorithms for simulating values from the marginal distribution of velocity for a single…

Computation · Statistics 2016-03-07 Jem Corcoran , Dale Jennings , Paul VaughanMiller

Forsstr\"om et al. [8] recently introduced a large class of $\{0,1\}$-valued processes that they named Poisson representable. In addition to deriving several interesting properties for these processes, their main focus was determining which…

Probability · Mathematics 2025-01-27 Stein Andreas Bethuelsen , Malin Palö Forsström

By consireding representation theory for non-associative algebras we construct the fundamental and adjoint representations of the octonion algebra. We then show how these representations by associative matrices allow a consistent octonionic…

High Energy Physics - Theory · Physics 2007-05-23 A. K. Waldron , G. C. Joshi

We present an efficient numerical method, inspired by transformation optics, for solving the Poisson equation in complex and arbitrarily shaped geometries. The approach operates by mapping the physical domain to a uniform computational…

Numerical Analysis · Mathematics 2026-02-03 Deepak Gautam , Bhooshan Paradkar

The chemical master equation (CME), which describes the discrete and stochastic molecule number dynamics associated with biological processes like transcription, is difficult to solve analytically. It is particularly hard to solve for…

Subcellular Processes · Quantitative Biology 2021-03-23 John J. Vastola , Gennady Gorin , Lior Pachter , William R. Holmes

The Poisson-Boltzmann equation offers an efficient way to study electrostatics in molecular settings. Its numerical solution with the boundary element method is widely used, as the complicated molecular surface is accurately represented by…

Numerical Analysis · Mathematics 2021-08-25 Stefan D. Search , Christopher D. Cooper , Elwin van't Wout

We develop sharp bounds on the statistical distance between high-dimensional permutation mixtures and their i.i.d. counterparts. Our approach establishes a new geometric link between the spectrum of a complex channel overlap matrix and the…

Statistics Theory · Mathematics 2025-09-17 Yiguo Liang , Yanjun Han

Motivated by Alain-Sol Sznitman's interlacement process, we consider the set of $\{0,1\}$-valued processes which can be constructed in an analogous way, namely as a union of sets coming from a Poisson process on a collection of sets. Our…

Probability · Mathematics 2025-06-03 Malin P. Forsström , Nina Gantert , Jeffrey E. Steif

High dimensional Poisson regression has become a standard framework for the analysis of massive counts datasets. In this work we estimate the intensity function of the Poisson regression model by using a dictionary approach, which…

Methodology · Statistics 2014-12-30 S. Ivanoff , F. Picard , V. Rivoirard

In this paper, we present a novel approach to approximate the gain function of the feedback particle filter (FPF). The exact gain function is the solution of a Poisson equation involving a probability-weighted Laplacian. The numerical…

Machine Learning · Computer Science 2022-06-07 S. Yagiz Olmez , Amirhossein Taghvaei , Prashant G. Mehta

The Poisson equation has wide applications in many areas of science and engineering. Although there are some quantum algorithms that can efficiently solve the Poisson equation, they generally require a fault-tolerant quantum computer which…

Quantum Physics · Physics 2021-08-25 Hailing Liu , Yusen Wu , Linchun Wan , Shijie Pan , Sujuan Qin , Fei Gao , Qiaoyan Wen

Many processes in chemistry and physics take place on timescales that cannot be explored using standard molecular dynamics simulations. This renders the use of enhanced sampling mandatory. Here we introduce an enhanced sampling method that…

Chemical Physics · Physics 2020-06-12 Jayashrita Debnath , Michele Parrinello

This note presents a rigorous introduction to a selection of distributions along with their Fourier transforms, which are commonly encountered in signal processing and, in particular, magnetic resonance imaging (MRI). In contrast to many…

Functional Analysis · Mathematics 2025-06-24 Kaibo Tang

Variational inference is a powerful tool for approximate inference, and it has been recently applied for representation learning with deep generative models. We develop the variational Gaussian process (VGP), a Bayesian nonparametric…

Machine Learning · Statistics 2016-04-19 Dustin Tran , Rajesh Ranganath , David M. Blei

Geostatistics is a branch of statistics concerned with stochastic processes over continuous domains, with Gaussian processes (GPs) providing a flexible and principled modelling framework. However, the high computational cost of simulating…

Computation · Statistics 2026-03-20 Flávio B. Gonçalves , Marcos O. Prates , Gareth O. Roberts

A modification of the Skellam and Poisson distributions is proposed for subsystems when the constraints imposed by the charge conservation law in the complete system are taken into account. Such distributions can be applied, for example,…

Nuclear Theory · Physics 2018-05-11 Yuri Sinyukov

This paper presents a novel approach to stochastic mortality modelling by using the Conway--Maxwell--Poisson (CMP) distribution to model death counts. Unlike standard Poisson or negative binomial distributions, the CMP is a more adaptable…

Methodology · Statistics 2026-01-06 Jackie Siaw Tze Wong , Emiliano A. Valdez

This paper presents a novel framework for enclosing solutions of Poisson's equation based on generalized sub- and super-solutions constructed using fundamental solutions. The conventional definition of sub- and super-solutions based on…

Numerical Analysis · Mathematics 2026-01-28 Kazuaki Tanaka , Ryoga Iwanami , Kaname Matsue , Hiroyuki Ochiai

Exact generalized stochastic representation of deterministic interaction between two dynamical (quantum or classical) systems is derived which helps when considering one of them to replace another by equivalent commutative ($c$-number…

Statistical Mechanics · Physics 2007-05-23 Yuriy E. Kuzovlev