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Related papers: Hamiltonian model for multidimensional epistasis

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The generalization of the concept of interaction-free evolutions (IFE) [A. Napoli, {\it et al.}, Phys. Rev. A {\bf 89}, 062104 (2014)] to the case of time-dependent Hamiltonians is discussed. It turns out that the time-dependent case allows…

Quantum Physics · Physics 2015-04-22 Dariusz Chruściński , Antonino Messina , Benedetto Militello , Anna Napoli

We review our results for the dynamics of isolated many-body quantum systems described by one-dimensional spin-1/2 models. We explain how the evolution of these systems depends on the initial state and the strength of the perturbation that…

Statistical Mechanics · Physics 2017-08-03 Lea F. Santos , E. Jonathan Torres-Herrera

Moving-habitat models track the density of a population whose suitable habitat shifts as a consequence of climate change. Whereas most previous studies in this area consider 1-dimensional space, we derive and study a spatially 2-dimensional…

Numerical Analysis · Mathematics 2023-12-14 Jane Shaw MacDonald , Yves Bourgault , Frithjof Lutscher

Key features of biological activity can often be captured by transitions between a finite number of semi-stable states that correspond to behaviors or decisions. We present here a broad class of dynamical systems that are ideal for modeling…

Dynamical Systems · Mathematics 2022-12-14 Megan Morrison , Lai-Sang Young

The equilibrium configuration of an engineering structure, able to withstand a certain loading condition, is usually associated with a local minimum of the underlying potential energy. However, in the nonlinear context, there may be other…

Chaotic Dynamics · Physics 2019-02-04 Jun Zhong , Lawrence N. Virgin , Shane D. Ross

We prove the existence of a unitary transformation that enables two arbitrarily given Hamiltonians in the same Hilbert space to be transformed into one another. The result is straightforward yet, for example, it lays the foundation to…

Quantum Physics · Physics 2020-12-09 Lian-Ao Wu , Dvira Segal

We study long-range interacting systems driven by external stochastic forces that act collectively on all the particles constituting the system. Such a scenario is frequently encountered in the context of plasmas, self-gravitating systems,…

Statistical Mechanics · Physics 2013-12-03 Cesare Nardini , Shamik Gupta , Stefano Ruffo , Thierry Dauxois , Freddy Bouchet

It is shown how to exactly simulate many-body interactions and multi-qubit gates by coupling finite dimensional systems, e.g., qubits with a continuous variable. Cyclic evolution in the phase space of such a variable gives rise to a…

Quantum Physics · Physics 2009-11-07 Xiaoguang Wang , Paolo Zanardi

Structure, composition and stability of ecological populations are shaped by the inter- and intra-species interactions within these communities. It remains to be fully understood how the interplay of these interactions with other factors,…

Populations and Evolution · Quantitative Biology 2023-01-16 Nava Leibovich , Jeremy Rothschild , Sidhartha Goyal , Anton Zilman

We discuss an autocatalytic reaction system: the cyclic competition model A1 + A2 --> 2 A2, A2 + A3 --> 2 A3, A3 + A4 --> 2 A4, A4 + A1 --> 2 A1), as well as its neutral counterpart. Migrations are introduced into the model. When stochastic…

Populations and Evolution · Quantitative Biology 2014-03-12 Margarita Ifti , Birger Bergersen

We develop a resonance theory to describe the evolution of open systems with time-dependent dynamics. Our approach is based on piecewise constant Hamiltonians: we represent the evolution on each constant bit using a recently developed…

Mathematical Physics · Physics 2011-08-25 Marco Merkli , Shannon Starr

We present for the first time to the nuclear physics community the Hamiltonian Mean Field (HMF) model. The model can be solved analytically in the canonical ensemble and shows a second-order phase transition in the thermodynamic limit.…

Nuclear Theory · Physics 2009-11-06 V. Latora , A. Rapisarda

We study feedback control of classical Hamiltonian systems with the controlling parameter varying slowly in time. The control aims to change system's energy. We show that the control problems can be solved with help of an adiabatic…

Other Condensed Matter · Physics 2007-05-23 A. E. Allahverdyan , K. G. Petrosyan , D. B. Saakian

A non-${\cal{PT}}$-symmetric Hamiltonian system of a Duffing oscillator coupled to an anti-damped oscillator with a variable angular frequency is shown to admit periodic solutions. The result implies that ${\cal{PT}}$-symmetry of a…

Chaotic Dynamics · Physics 2020-11-11 Pijush K. Ghosh , Puspendu Roy

When beneficial mutations are relatively common, competition between multiple unfixed mutations can reduce the rate of fixation in well-mixed asexual populations. We introduce a one dimensional model with a steady accumulation of beneficial…

Populations and Evolution · Quantitative Biology 2013-02-19 Jakub Otwinowski , Stefan Boettcher

We propose and study a model for the equilibrium statistical mechanics of a pressurised semiflexible polymer ring. The Hamiltonian has a term which couples to the algebraic area of the ring and a term which accounts for bending…

Statistical Mechanics · Physics 2009-11-13 Mithun K. Mitra , Gautam I. Menon , R. Rajesh

We investigate the quantum chaotic properties of the Dicke Hamiltonian; a quantum-optical model which describes a single-mode bosonic field interacting with an ensemble of $N$ two-level atoms. This model exhibits a zero-temperature quantum…

Condensed Matter · Physics 2009-02-06 Clive Emary , Tobias Brandes

In biology and ecology, individuals or communities of individuals living in unpredictable environments often alternate between different evolutionary strategies to spread and reduce risks. Such behavior is commonly referred to as…

Populations and Evolution · Quantitative Biology 2015-03-11 Jorge Hidalgo , Simone Pigolotti , Miguel A. Munoz

High control in the preparation and manipulation of states is an experimental and theoretical important task in many quantum protocols. Shortcuts to adiabaticity methods allow to obtain desirable states of a adiabatic dynamics but in short…

Quantum Physics · Physics 2024-10-28 Jonas F. G. Santos

We show a procedure for engineering effective interactions between two modes in a bimodal cavity. Our system consists of one or more two-level atoms, excited by a classical field, interacting with both modes. The two effective Hamiltonians…

Quantum Physics · Physics 2011-11-22 F. O. Prado , F. S. Luiz , J. M. Villas-Bôas , A. M. Alcalde , E. I. Duzzioni , L. Sanz