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Under supercoiling constraints, naked DNA, such as a large part of bacterial DNA, folds into braided structures called plectonemes. The double-helix can also undergo local structural transitions, leading to the formation of denaturation…

Biological Physics · Physics 2017-08-08 Thibaut Lepage , Ivan Junier

Culturing cells confined in microscale geometries has been reported in many studies this last decade, in particular following the development of microfluidic-based applications and lab-on-a-chip devices. Such studies usually examine growth…

Emission in the ultraviolet continuum is a salient signature of the hot, massive and consequently short-lived, stellar population that traces recent or ongoing star formation. With the aim of mapping star forming regions and morphologically…

We study wave propagation in two-dimensional granular crystals under the Hertzian contact law consisting of hexagonal packings of spheres under various basin geometries including hexagonal, triangular, and circular basins which can be tiled…

Pattern Formation and Solitons · Physics 2019-01-01 Tianshu Hua , Robert A. Van Gorder

Photosynthetic eukaryotes show a remarkable variability in photosynthesis, including large differences in light harvesting proteins and pigment composition. In vivo circular spectropolarimetry enables us to probe the molecular architecture…

Biomolecules · Quantitative Biology 2018-08-27 C. H. Lucas Patty , Freek Ariese , Wybren Jan Buma , Inge Loes ten Kate , Rob J. M. van Spanning , Frans Snik

Bacteria can adjust the structure of colonies and biofilms to enhance their survival rate under external stress. Here, we explore the link between bacterial interaction forces and colony structure. We show that the activity of extracellular…

Models based on surfactant driven instabilities have been employed to describe pattern formation by swarming bacteria. However, by definition, such models cannot account for the effect of bacterial sensing and decision making. Here we…

Bacteria frequently colonize natural microcavities such as gut crypts, plant apoplasts, and soil pores. Recent studies have shown that the physical structure of these spaces plays a crucial role in shaping the stability and resilience of…

Populations and Evolution · Quantitative Biology 2025-03-28 Valentin Slepukhin , Víctor Peris Yagüe , Christian Westendorf , Birgit Koch , Oskar Hallatschek

The emergence of the phenomenon known as ABR (anti-bacterial resistance), is the result of the gradual decrease in the efficacy of antibiotics and the increase in the cost of producing new antibiotics. Hence, alternative solutions to…

Populations and Evolution · Quantitative Biology 2024-02-08 Nouf Alghamdi , Mal Horsburgh , Bakhtier Vasiev

A study of the induced effect of different types of weak magnetic field exposure on bacterial growth is performed, comparing the relative changes after removal from the magnetic fields. This investigation is relevant to understand the…

Biological Physics · Physics 2019-12-03 Samina Masood , Iram Saleem , Derek Smith , Wei-Kan Chu

Many motile microorganisms react to environmental light cues with a variety of motility responses guiding cells towards better conditions for survival and growth. The use of spatial light modulators could help to elucidate the mechanisms of…

We study pattern formation in a chemotaxis model of bacteria and soil carbon dynamics as an example system where transient dynamics can give rise to pattern formation outside of Turing unstable regimes. We use a detailed analysis of the…

The ecological invasion problem in which a weaker exotic species invades an ecosystem inhabited by two strongly competing native species is modelled by a three-species competition-diffusion system. It is known that for a certain range of…

Populations and Evolution · Quantitative Biology 2018-11-01 Lorenzo Contento , Masayasu Mimura

We study the ultraviolet problem for models of a finite-dimensional quantum mechanical system linearly coupled to a bosonic quantum field, such as the (many-)spin boson model or its rotating-wave approximation. If the state change of the…

Mathematical Physics · Physics 2025-02-10 Benjamin Hinrichs , Jonas Lampart , Javier Valentín Martín

Emergence of regular spatial patterns is a hallmark in living matter ranging from subcellular organelles to developing embryos and to ecosystems. Mechanisms for the formation of ordered spatial patterns in biology often require chemical…

Biological Physics · Physics 2024-03-15 Haoran Xu , Yilin Wu

When waves are propagated through a medium with scatters and these elements are positioned periodically, as in the crystal structures, multiple scattering leads to a phenomenon known as banded structures. This means that waves can propagate…

Soft Condensed Matter · Physics 2013-05-20 Enrique Orduna-Malea

We use a state-of-the-art physics-based model of electromagnetic scattering to analyze average circular polarization ratios measured for the A and B rings of Saturn at a wavelength of 12.6 cm. This model is directly based on the Maxwell…

Astrophysics · Physics 2011-02-11 Michael I. Mishchenko , Janna M. Dlugach

Run-and-tumble is a common but vital strategy that bacteria employ to explore environment suffused with boundaries, as well as to escape from entrapment. In this study we reveal how this strategy and the resulting dynamical behavior can be…

Soft Condensed Matter · Physics 2025-01-30 Premkumar Leishangthem , Xuan Wang , Junan Chen , Shengqi Yang , Xinliang Xu

We explore if carbon-based macromolecules (such as DNA) in the environments of stars other than the Sun are able to survive the effects of photospheric stellar radiation, such as UV-C. Therefore, we focus on main-sequence stars of spectral…

Astrophysics · Physics 2007-12-20 M. Cuntz , L. Gurdemir , E. F. Guinan , R. L. Kurucz

We suggest a new type of the undulator radiation which is generated by an ultra-relativistic particle channeled along a periodically bent crystallographic plane or axis. The electromagnetic radiation arises mainly due to the bending of the…

Accelerator Physics · Physics 2009-11-07 A. V. Korol , A. V. Solov'yov , W. Greiner
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