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We report a novel morphological transition in a Bacillus subtilis colony initially growing under ambient conditions, after ultraviolet radiation exposure. The bacteria in the central regions of the colonies are observed to migrate towards…

Condensed Matter · Physics 2009-11-07 Anna M. Delprato , Azadeh Samadani , A. Kudrolli , L. S. Tsimring

We report the spatio-temporal response of {\it Bacillus subtilis} growing on a nutrient-rich layer of agar to ultra-violet (UV) radiation. Below a crossover temperature, the bacteria are confined to regions that are shielded from UV…

Condensed Matter · Physics 2009-10-31 T. Neicu , A. Pradhan , D. A. Larochelle , A. Kudrolli

The enteric bacterium Proteus mirabilis, which is a pathogen that forms biofilms in vivo, can swarm over hard surfaces and form concentric ring patterns in colonies. Colony formation involves two distinct cell types: swarmer cells that…

Populations and Evolution · Quantitative Biology 2015-05-28 Chuan Xue , Elena O. Budrene , Hans G. Othmer

Ultraviolet radiation is known to inhibit photosynthesis, induce DNA destruction and cause damage to a wide variety of proteins and lipids. In particular, UV radiation between 200-300 nm becomes energetically very damaging to most of the…

Astrophysics · Physics 2009-11-11 Andrea P. Buccino , Guillermo A. Lemarchand , Pablo J. D. Mauas

Bacterial colonies are a well-known example of living active matter, exhibiting collective behaviors such as nematic alignment and collective motion that play an important role in the spread of microbial infections. While the underlying…

The periodic swarming of bacteria is one of the simplest examples for pattern formation produced by the self-organized collective behavior of a large number of organisms. In the spectacular colonies of Proteus mirabilis (the most common…

Biological Physics · Physics 2016-09-08 Andras Czirok , Mitsugu Matsushita , Tamas Vicsek

Ultraviolet circularly polarised light has been suggested as the initial cause of the homochirality of organic molecules in terrestrial organisms, via enantiomeric selection of prebiotic molecules by asymmetric photolysis. We present a…

Bacterial swarming is a rapid mass-migration, in which thousands of cells spread collectively to colonize a surface. Physically, swarming is a natural example of active particles that use energy to generate motion. Accordingly,…

Soft Condensed Matter · Physics 2019-11-14 Avraham Be`er , Bella Ilkanaiv , Renan Gross , Daniel B. Kearns , Sebastian Heidenreich , Markus Bär , Gil Ariel

How systems are endowed with migration capacity is a fascinating question with implications ranging from the design of novel active systems to the control of microbial populations. Bacteria, which can be found in a variety of environments,…

Biological Physics · Physics 2017-07-03 Marc Hennes , Julien Tailleur , Gaëlle Charron , Adrian Daerr

Bacterial biofilms collectively develop distinct and ordered structures, including fibers, bundles, and branches. Often, it is unclear how these structural motifs convey specific advantages to bacterial strains under challenging conditions.…

Soft Condensed Matter · Physics 2022-11-16 Mustafa Basaran , Tevfik Can Yüce , Yusuf Ilker Yaman , Roman Vetter , Askin Kocabas

Bacteria can form a great variety of spatially heterogeneous cell density patterns, ranging from simple concentric rings to dynamical spiral waves appearing in growing colonies. These pattern formation phenomena are important as they…

Populations and Evolution · Quantitative Biology 2025-01-17 John S. Chuang , Riccardo Rao , Stanislas Leibler

It is shown, that spontaneous ultraviolet radiation of cells (infusoria) plays the role of agent, restricting the upper limit of the quantity of cells in quasi-stationary phase of cultire's development. The spectral region of this radiation…

Biological Physics · Physics 2007-05-23 A. A. Kozlov

We estimate the frequency of intermittent hypermutation events and disruptions of planetary/satellite photochemistry due to ultraviolet radiation from core collapse supernova explosions. Calculations are presented for planetary systems in…

Astrophysics · Physics 2007-05-23 John M. Scalo , J. Craig Wheeler , Peter Williams

A diffusion-reaction model for the growth of bacterial colonies is presented. The often observed cooperative behavior developed by bacteria which increases their motility in adverse growth conditions is here introduced as a nonlinear…

Condensed Matter · Physics 2009-10-31 A. M. Lacasta , I. R. Cantalapiedra , C. E. Auguet , A. Penaranda , L. Ramirez-Piscina

Castillo, et al. report hormesis by background levels of radiation, at which there is $< 10^{-3}$ ionization per bacterium in a replication time. This suggests radiation products accumulate in the growth medium over much longer times.…

Biological Physics · Physics 2016-04-28 J. I. Katz

To survive starvation, Bacillus subtilis forms durable spores. After asymmetric cell division, the septum grows around the forespore in a process called engulfment, but the mechanism of force generation is unknown. Here, we derived a novel…

Subcellular Processes · Quantitative Biology 2017-10-16 Li-Wei Yap , Robert G. Endres

The transition from localized to systemic spreading of bacteria, viruses and other agents is a fundamental problem that spans medicine, ecology, biology and agriculture science. We have conducted experiments and simulations in a simple…

Populations and Evolution · Quantitative Biology 2009-11-10 Anna L. Lin , Bernward A. Mann , Gelsy Torres-Oviedo , Bryan Lincoln , Josef Kas , Harry L. Swinney

Giant unilamellar vesicles (GUVs) composed of as few as three lipid species can phase separate into small-scale lipid domains with stripes and dots patterns. These patterns have been experimentally characterized in terms of how their size…

Soft Condensed Matter · Physics 2025-05-21 Qiwei Yu , Andrej Košmrlj

Various bacterial strains (e.g. strains belonging to the genera Bacillus, Paenibacillus, Serratia and Salmonella) exhibit colonial branching patterns during growth on poor semi-solid substrates. These patterns reflect the bacterial…

Condensed Matter · Physics 2009-10-31 Yonathan Kozlovsky , Inon Cohen , Ido Golding , Eshel Ben-Jacob

Bacteria possess diverse mechanisms to regulate their motility in response to environmental and physiological signals, enabling them to navigate complex habitats and adapt their behavior. Among these mechanisms, interspecies recognition…

Populations and Evolution · Quantitative Biology 2025-12-01 Mattia Mattei , David Soriano Paños , Mahantesh Halappanavar , Alex Arenas
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