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Connectivity and layout of underlying networks largely determine the behavior of many environments. For example, transportation networks determine the flow of traffic in cities, or maps determine the difficulty and flow in games. Designing…

Computational Geometry · Computer Science 2015-11-02 Chi-Han Peng , Niloy J. Mitra , Fan Bao , Dong-Ming Yan , Peter Wonka

The need to build a link between the structure of a complex network and the dynamical properties of the corresponding complex system (comprised of multiple low dimensional systems) has recently become apparent. Several attempts to tackle…

Chaotic Dynamics · Physics 2012-06-18 Michael Small , Kevin Judd , Thomas Stemler

Many neural nets appear to represent data as linear combinations of "feature vectors." Algorithms for discovering these vectors have seen impressive recent success. However, we argue that this success is incomplete without an understanding…

Artificial Intelligence · Computer Science 2024-07-23 Martin Wattenberg , Fernanda B. Viégas

Identifying variables responsible for changes to a biological system enables applications in drug target discovery and cell engineering. Given a pair of observational and interventional datasets, the goal is to isolate the subset of…

Machine Learning · Computer Science 2025-06-02 Menghua Wu , Umesh Padia , Sean H. Murphy , Regina Barzilay , Tommi Jaakkola

Understanding the relationship between the dynamics of neural processes and the anatomical substrate of the brain is a central question in neuroscience. On the one hand, modern neuroimaging technologies, such as diffusion tensor imaging,…

Inferring network topology from dynamical observations is a fundamental problem pervading research on complex systems. Here, we present a simple, direct method to infer the structural connection topology of a network, given an observation…

Chaotic Dynamics · Physics 2015-05-19 Srinivas Gorur Shandilya , Marc Timme

The study of networks has witnessed an explosive growth over the past decades with several ground-breaking methods introduced. A particularly interesting -- and prevalent in several fields of study -- problem is that of inferring a function…

Many networks are important because they are substrates for dynamical systems, and their pattern of functional connectivity can itself be dynamic -- they can functionally reorganize, even if their underlying anatomical structure remains…

Neurons and Cognition · Quantitative Biology 2010-04-21 Cosma Rohilla Shalizi , Marcelo F. Camperi , Kristina Lisa Klinkner

Degree distributions of graph representations for compact urban patterns are scale-dependent. Therefore, the degree statistics alone does not give us the enough information to reach a qualified conclusion on the structure of urban spatial…

Physics and Society · Physics 2007-09-28 D. Volchenkov , Ph. Blanchard

In graph theory and its practical networking applications, e.g., telecommunications and transportation, the problem of finding paths has particular importance. Selecting paths requires giving scores to the alternative solutions to drive a…

Networking and Internet Architecture · Computer Science 2025-11-10 Giovanni Fiaschi , Carlo Vitucci , Thomas Westerbäck , Daniel Sundmark , Thomas Nolte

Understanding and analyzing cascading failures in power grids have been the focus of many researchers for years. However, the complex interactions among the large number of components in these systems and their contributions to cascading…

Physics and Society · Physics 2020-06-15 Upama Nakarmi , Mahshid Rahnamay Naeini , Md Jakir Hossain , Md Abul Hasnat

Networked dynamical systems are common throughout science in engineering; e.g., biological networks, reaction networks, power systems, and the like. For many such systems, nonlinearity drives populations of identical (or near-identical)…

Dynamical Systems · Mathematics 2023-02-10 James Koch , Zhao Chen , Aaron Tuor , Jan Drgona , Draguna Vrabie

There are hierarchical characteristics in the network and how to effectively reveal the hierarchical characteristics in the network is a problem in the research of network structure. If a node is assigned to the community to which it…

Social and Information Networks · Computer Science 2020-03-06 Shun Fu , Ji Xu

Learning the dynamics of complex systems features a large number of applications in data science. Graph-based modeling and inference underpins the most prominent family of approaches to learn complex dynamics due to their ability to capture…

Signal Processing · Electrical Eng. & Systems 2018-07-06 Luis M. Lopez-Ramos , Daniel Romero , Bakht Zaman , Baltasar Beferull-Lozano

Using methods from algebraic graph theory and convex optimization, we study the relationship between local structural features of a network and spectral properties of its Laplacian matrix. In particular, we derive expressions for the…

Optimization and Control · Mathematics 2016-11-17 Victor M. Preciado , Ali Jadbabaie , George C. Verghese

Neuronal networks constitute a special class of dynamical systems, as they are formed by individual geometrical components, namely the neurons. In the existing literature, relatively little attention has been given to the influence of…

Neurons and Cognition · Quantitative Biology 2015-05-13 Sebastian Ahnert , Luciano da Fontoura Costa

The increasing prevalence of graph-structured data across various domains has intensified greater interest in graph classification tasks. While numerous sophisticated graph learning methods have emerged, their complexity often hinders…

Machine Learning · Computer Science 2025-09-03 Saiful Islam , Md. Nahid Hasan , Pitambar Khanra

Systems of dynamical interactions between competing species can be used to model many complex systems, and can be mathematically described by {\em random} networks. Understanding how patterns of activity arise in such systems is important…

Adaptation and Self-Organizing Systems · Physics 2016-01-21 Nick McCullen , Thomas Wagenknecht

Gene interaction graphs aim to capture various relationships between genes and can represent decades of biology research. When trying to make predictions from genomic data, those graphs could be used to overcome the curse of dimensionality…

Higher-order interactions provide a nuanced understanding of the relational structure of complex systems beyond traditional pairwise interactions. However, higher-order network analyses also incur more cumbersome interpretations and greater…

Physics and Society · Physics 2026-01-07 Alec Kirkley , Helcio Felippe , Federico Battiston