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Recent research is revealing how cognitive processes are supported by a complex interplay between the brain and the rest of the body, which can be investigated by the analysis of physiological features such as breathing rhythms, heart rate,…

Quantitative Methods · Quantitative Biology 2023-03-10 Fernando E. Rosas , Diego Candia-Rivera , Andrea I Luppi , Yike Guo , Pedro A. M. Mediano

In awake animals, the activity of the cerebral cortex is highly complex, with neurons firing irregularly with apparent Poisson statistics. One way to characterize this complexity is to take advantage of the high interconnectivity of…

Neurons and Cognition · Quantitative Biology 2009-04-29 Martin Pospischil , Zuzanna Piwkowska , Thierry Bal , Alain Destexhe

Existing methods for multi-modal time series representation learning aim to disentangle the modality-shared and modality-specific latent variables. Although achieving notable performances on downstream tasks, they usually assume an…

Machine Learning · Computer Science 2024-05-28 Ruichu Cai , Zhifang Jiang , Zijian Li , Weilin Chen , Xuexin Chen , Zhifeng Hao , Yifan Shen , Guangyi Chen , Kun Zhang

Electroencephalography produces high-dimensional, stochastic data from which it might be challenging to extract high-level knowledge about the phenomena of interest. We address this challenge by applying the framework of variational…

Machine Learning · Computer Science 2022-08-18 Maksim Zhdanov , Saskia Steinmann , Nico Hoffmann

Magnetoencephalography (MEG) provides dynamic spatial-temporal insight of neural activities in the cortex. Because the number of possible sources is far greater than the number of MEG detectors, the proposition to localize sources directly…

Quantitative Methods · Quantitative Biology 2009-03-06 Hung-I Pai , Chih-Yuan Tseng , H. C. Lee

Multi-sensor microelectrodes for extracellular action potential recording have significantly improved the quality of in vivo recorded neuronal signals. These microelectrodes have also been instrumental in the localization of neuronal signal…

Neurons and Cognition · Quantitative Biology 2013-11-18 Chang Won Lee , Agnieszka A. Szymanska , Shun Chi Wu , A. Lee Swindlehurst , Zoran Nenadic

Subcortical structures play a critical role in brain function. However, options for assessing electrophysiological activity in these structures are limited. Electromagnetic fields generated by neuronal activity in subcortical structures can…

Neural responses in the cortex change over time both systematically, due to ongoing plasticity and learning, and seemingly randomly, due to various sources of noise and variability. Most previous work considered each of these processes,…

Neurons and Cognition · Quantitative Biology 2018-07-25 Laurence Aitchison , Guillaume Hennequin , Mate Lengyel

While measurement advances now allow extensive surveys of gene activity (large numbers of genes across many samples), interpretation of these data is often confounded by noise -- expression counts can differ strongly across samples due to…

We consider two areas of research that have been developing in parallel over the last decade: blind source separation (BSS) and electromagnetic source estimation (ESE). BSS deals with the recovery of source signals when only mixtures of…

Data Analysis, Statistics and Probability · Physics 2015-01-22 Kevin H. Knuth , Herbert G. Vaughan

We present a new approach to the electromagnetic inverse problem that explicitly addresses the ambiguity associated with its ill-posed character. Rather than calculating a single ``best'' solution according to some criterion, our approach…

Neurons and Cognition · Quantitative Biology 2007-05-23 David M. Schmidt , John S. George , C. C. Wood

The brain effortlessly extracts latent causes of stimuli, but how it does this at the network level remains unknown. Most prior attempts at this problem proposed neural networks that implement independent component analysis which works…

Signal Processing · Electrical Eng. & Systems 2023-04-11 Bariscan Bozkurt , Ates Isfendiyaroglu , Cengiz Pehlevan , Alper T. Erdogan

Understanding the function of complex cortical circuits requires the simultaneous recording of action potentials from many neurons in awake and behaving animals. Practically, this can be achieved by extracellularly recording from multiple…

Quantitative Methods · Quantitative Biology 2008-09-25 Ueli Rutishauser , Erin M. Schuman , Adam N. Mamelak

Intracellular recordings of neuronal membrane potential are a central tool in neurophysiology. In many situations, especially in vivo, the traditional limitation of such recordings is the high electrode resistance, which may cause…

Neurons and Cognition · Quantitative Biology 2007-11-15 R. Brette , Z. Piwkowska , M. Rudolph-Lilith , T. Bal , A. Destexhe

Bayesian neural networks with latent variables are scalable and flexible probabilistic models: They account for uncertainty in the estimation of the network weights and, by making use of latent variables, can capture complex noise patterns…

Machine Learning · Statistics 2018-06-19 Stefan Depeweg , José Miguel Hernández-Lobato , Finale Doshi-Velez , Steffen Udluft

Neuromodulations as observed in the extracellular electrical potential recordings obtained from Electroencephalograms (EEG) manifest as organized, transient patterns that differ statistically from their featureless noisy background.…

Signal Processing · Electrical Eng. & Systems 2019-05-28 Shailaja Akella , Jose C. Principe

An important problem in neuroscience is to understand how brains extract relevant signals from mixtures of unknown sources, i.e., perform blind source separation. To model how the brain performs this task, we seek a biologically plausible…

Signal Processing · Electrical Eng. & Systems 2022-03-08 David Lipshutz , Cengiz Pehlevan , Dmitri B. Chklovskii

Independent component analysis (ICA) has proven useful for modeling brain and electroencephalographic (EEG) data. Here, we present a new, generalized method to better capture the dynamics of brain signals than previous ICA algorithms. We…

Quantitative Methods · Quantitative Biology 2007-05-23 Jorn Anemuller , Terrence J. Sejnowski , Scott Makeig

This work presents a multiscale model reduction approach to discontinuous fields identification problems in the framework of Bayesian inference. An ensemble-based variable separation (VS) method is proposed to approximate multiscale basis…

Numerical Analysis · Mathematics 2019-05-31 Na Ou , Guang Lin , Lijian Jiang

Cortical circuits exhibit high levels of response diversity, even across apparently uniform neuronal populations. While emerging data-driven approaches exploit this heterogeneity to infer effective models of cortical circuit computation…

Neurons and Cognition · Quantitative Biology 2025-11-06 Mohammadreza Soltanipour , Stefan Treue , Fred Wolf