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A novel model of thermal regulation of homoeothermic animals has been implemented. The model is based on a non-equilibrium thermodynamic approach which introduces entropy balance and the rate of entropy generation as a formulation of The…

Other Quantitative Biology · Quantitative Biology 2013-08-19 Michael Zakharov , Michael Sadovsky

We study long-range interacting systems perturbed by external stochastic forces. Unlike the case of short-range systems, where stochastic forces usually act locally on each particle, here we consider perturbations by external stochastic…

Statistical Mechanics · Physics 2013-12-04 Cesare Nardini , Shamik Gupta , Stefano Ruffo , Thierry Dauxois , Freddy Bouchet

The assembly and persistence of ecological communities can be understood as the result of the interaction and migration of species. Here we study a single community subject to migration from a species pool in which inter-specific…

Populations and Evolution · Quantitative Biology 2023-07-27 Matthew Dopson , Clive Emary

In this paper we consider interacting particle systems which are frequently used to model collective behavior in animal swarms and other applications. We study the stability of orientationally aligned formations called flock solutions, one…

Dynamical Systems · Mathematics 2014-03-31 J. A. Carrillo , Y. Huang , S. Martin

We reconsider a well-known relationship between the fluctuation theorem and the second law of thermodynamics by evaluating a probability measure-valued process. In order to establish a bridge between microscopic and macroscopic behaviors,…

Statistical Mechanics · Physics 2015-03-19 Yuki Sughiyama , Masayuki Ohzeki

Systems with long range interactions display some anomalies when its dynamics and thermodynamics are studied below certain conditions. Among these anomalies are the quasi- stationary states, which are exacerbated because of special initial…

Statistical Mechanics · Physics 2017-02-15 Boris Atenas , Sergio Curilef

Thermal contact is the archetype of non-equilibrium processes driven by constant non-equilibrium constraints enforced by reservoirs exchanging conserved microscopic quantities. In models with a finite number of possible configurations, if…

Statistical Mechanics · Physics 2015-05-06 Françoise Cornu , Michel Bauer

The fundamental dynamic stability of heat conduction theories beyond Fourier is analyzed in the framework of nonequilibrium thermodynamics. It is shown, that the thermodynamic framework, concave entropy and nonnegative entropy production,…

Statistical Mechanics · Physics 2026-01-06 R. Somogyfoki , A. Famà , L. Restuccia , P. Ván

In any ecosystem, the conditions of the environment and the characteristics of the species that inhabit it are entangled, co-evolving in space and time. We introduce a model that couples active agents with a dynamic environment, interpreted…

Populations and Evolution · Quantitative Biology 2025-12-10 G. Briozzo , G. J. Sibona , F. Peruani

Despite the importance of the Second Law of Thermodynamics, it is not absolute. Statistical mechanics implies that, given sufficient time, systems near equilibrium will spontaneously fluctuate into lower-entropy states, locally reversing…

High Energy Physics - Theory · Physics 2015-05-30 Anthony Aguirre , Sean M. Carroll , Matthew C. Johnson

A central feature of complex systems is the relevance and entanglement of different levels of description. For instance, the dynamics of ecosystems can be alternatively described in terms of large ecological processes and classes of…

Populations and Evolution · Quantitative Biology 2025-10-06 Juan Giral Martínez , Silvia de Monte , Matthieu Barbier

This study examines a new formulation of non-equilibrium thermodynamics, which gives a conditional derivation of the ``maximum entropy production'' (MEP) principle for flow and/or chemical reaction systems at steady state. The analysis uses…

Populations and Evolution · Quantitative Biology 2009-08-25 Robert K. Niven

Mathematical modelling of the evolution of the size-spectrum dynamics in aquatic ecosystems was discovered to be a powerful tool to have a deeper insight into impacts of human- and environmental driven changes on the marine ecosystem. In…

Analysis of PDEs · Mathematics 2024-01-02 Laura Kanzler , Benoit Perthame , Benoit Sarels

An alternative approach - nonequilibrium evolution thermodynamics, is compared with classical Landau approach. A statistical justification of the approach is carried out with help of probability distribution function on an example of a…

Statistical Mechanics · Physics 2010-08-13 Leonid S. Metlov

Populations of competing biological species exhibit a fascinating interplay between the nonlinear dynamics of evolutionary selection forces and random fluctuations arising from the stochastic nature of the interactions. The processes…

Populations and Evolution · Quantitative Biology 2012-05-08 A. Dobrinevski , E. Frey

The statistical properties of an ecosystem composed of species interacting via pairwise, random interactions and deterministic, concentration limiting self-interaction are studied analytically with tools of equilibrium statistical mechanics…

Disordered Systems and Neural Networks · Physics 2009-11-07 Viviane M. de Oliveira , J. F. Fontanari

How do interactions between species influence their spatial distribution in an ecosystem? To answer this question, we introduce a spatially-extended ecosystem of Generalized Lotka-Volterra type, where species can diffuse and interactions…

Statistical Mechanics · Physics 2025-01-08 Alessandro Salvatore , Fabián Aguirre-López , Ruben Zakine

We provide a non-equilibrium thermodynamic description of the life-cycle of a droplet based, chemically feasible, system of protocells. By coupling the protocells metabolic kinetics with its thermodynamics, we demonstrate how the system can…

Living systems are forced away from thermodynamic equilibrium by exchange of mass and energy with their environment. In order to model a biochemical reaction network in a non-equilibrium state one requires a mathematical formulation to…

Molecular Networks · Quantitative Biology 2012-02-21 Ronan M. T. Fleming , Ines Thiele

Equilibrium statistical mechanics provides a robust framework for characterizing phase transitions in systems whose microsopic dynamics are time-reversible. Efforts to develop and validate theoretical frameworks for time-irreversible,…

Soft Condensed Matter · Physics 2025-12-18 Stuart J. Thomson , Jack-William Barotta , Daniel M. Harris
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