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The specific morphology of germinal centers is analyzed in the context of the optimization of the humoral immune response. The relevance of dark and light zones for the affinity maturation process is investigated in the framework of a…

Biological Physics · Physics 2007-05-23 Michael Meyer-Hermann

During the germinal center reaction a characteristic morphology is developed. In the framework of a recently developed space-time-model for the germinal center a mechanism for the formation of dark and light zones has been proposed. The…

Biological Physics · Physics 2007-05-23 Tilo Beyer , Michael Meyer-Hermann , Gerhard Soff

A central feature of vertebrate immune response is affinity maturation, wherein antibody-producing B cells undergo evolutionary selection in microanatomical structures called germinal centers, which form in secondary lymphoid organs upon…

Populations and Evolution · Quantitative Biology 2024-02-15 Bertrand Ottino-Loffler , Gabriel Victora

We discuss the origin of two classes of germinal centers that have been observed during humoral immune responses: Some germinal centers develop very well and give rise to a large number of high affinity antibody producing plasma cells.…

Biological Physics · Physics 2007-05-23 Michael Meyer-Hermann , Tilo Beyer

The population dynamics theory of B cells in a typical germinal center could play an important role in revealing how affinity maturation is achieved. However, the existing models encountered some conflicts with experiments. To resolve these…

Populations and Evolution · Quantitative Biology 2015-05-18 Jingshan Zhang , Eugene I. Shakhnovich

Germinal centres are anatomically defined lymphoid organ structures that mediate B cell affinity maturation and affect the quality of humoral immune responses. Mathematical models based on differential equations or agent-based simulations…

Quantitative Methods · Quantitative Biology 2019-11-22 Lisa Buchauer , Hedda Wardemann

Affinity maturation of antibodies during immune responses is achieved by multiple rounds of somatic hypermutation and subsequent preferential selection of those B cells that express B cell receptors with improved binding characteristics for…

Cell Behavior · Quantitative Biology 2007-05-23 Michael Meyer-Hermann , Philip K. Maini , Dagmar Iber

Lymphocyte selection is a fundamental operation of adaptive immunity. In order to produce B-lymphocytes with a desired antigenic profile, a process of mutation-selection occurs in the germinal center, which is part of the lymph nodes. We…

Analysis of PDEs · Mathematics 2015-01-28 Vuk Milisic , Gilles Wainrib

We analyze the interactions between division, mutation and selection in a simplified evolutionary model, assuming that the population observed can be classified into fitness levels. The construction of our mathematical framework is…

Probability · Mathematics 2018-01-04 Irene Balelli , Vuk Milišić , Gilles Wainrib

We introduce a new model for the dynamics of centroblasts and centrocytes in a germinal center. The model reduces the germinal center reaction to the elements considered as essential and embeds proliferation of centroblasts, point mutations…

Biological Physics · Physics 2009-09-25 Michael Meyer-Hermann , Andreas Deutsch , Michal Or-Guil

B cells and the antibodies they produce are vital to health and survival, motivating research on the details of the mutational and evolutionary processes in the germinal centers (GC) from which mature B cells arise. It is known that B cells…

We study the maturation of the antibody population following primary antigen presentation as a global optimization problem. Emphasis is placed on the trade-off between the safety of mutations that lead to local improvements to the…

Quantitative Methods · Quantitative Biology 2007-05-23 Patricia Theodosopoulos , Ted Theodosopoulos

Properties of reaction zones resulting from A+B -> C type reaction-diffusion processes are investigated by analytical and numerical methods. The reagents A and B are separated initially and, in addition, there is an initial macroscopic…

Other Condensed Matter · Physics 2009-11-11 Ioana Bena , Michel Droz , Kirsten Martens , Zoltan Racz

We apply the ``zone of reactions'' as a tool in studying the interacting system formed in a collision of relativistic nuclei. With the use of the intensity of collisions of particles (the number of collisions in unit volume per unit time),…

Nuclear Theory · Physics 2015-07-28 D. Anchishkin , A. Muskeyev , S. Yezhov

The fundamental processes of biological development are governed by multiple signaling molecules that create non-uniform concentration profiles known as morphogen gradients. It is widely believed that the establishment of morphogen…

Biological Physics · Physics 2015-06-18 Hamid Teimouri , Anatoly B. Kolomeisky

There is perceptual and physiological evidence that the retina registers and signals luminance and luminance contrast using dual-channel mechanisms. This process begins in the retina, wherein the luminance of a uniform zone and…

Image and Video Processing · Electrical Eng. & Systems 2024-12-30 Ernest Greene

The mammalian adaptive immune system has evolved over millions of years to become an incredibly effective defense against foreign antigens. The adaptive immune system's humoral response creates plasma B cells and memory B cells, each with…

Cell Behavior · Quantitative Biology 2021-06-21 Stephen Lindsly , Maya Gupta , Cooper Stansbury , Indika Rajapakse

A zone of reactions is determined and then exploited as a tool in studying the space-time structure of an interacting system formed in a collision of relativistic nuclei. The time dependence of the reaction rates integrated over spatial…

Nuclear Theory · Physics 2015-07-28 Dmitry Anchishkin , Anton Muskeyev , Stanislav Yezhov

Thermally activated magnetization decay is studied in ensembles of clusters of interacting dipolar moments by applying the master-equation formalism, as a model of thermal relaxation in systems of interacting single-domain ferromagnetic…

Statistical Mechanics · Physics 2014-05-27 O. Hovorka , J. Barker , G. Friedman , R. W. Chantrell

The dynamics between healthy and malignant cells at the avascular stage of growth is described by a set of chemical reactions representing the populations of both types of cells. We obtain a generalization of the logistic-Gompertz dynamics…

Biological Physics · Physics 2023-04-26 Luiza M. S. Miranda , Andre M. C. Souza
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