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We present an algorithm for phylogenetic reconstruction using quartets that returns the correct topology for $n$ taxa in $O(n \log n)$ time with high probability, in a probabilistic model where a quartet is not consistent with the true…

Populations and Evolution · Quantitative Biology 2010-10-12 Daniel G. Brown , Jakub Truszkowski

Adapting a pretrained diffusion model to new objectives at inference time remains an open problem in generative modeling. Existing steering methods suffer from inaccurate value estimation, especially at high noise levels, which biases…

Machine Learning · Computer Science 2025-06-27 Vineet Jain , Kusha Sareen , Mohammad Pedramfar , Siamak Ravanbakhsh

Two prominent methods for integer factorization are those based on general integer sieve and elliptic curve. The general integer sieve method can be specialized to quadratic integer sieve method. In this paper, a probability analysis for…

General Mathematics · Mathematics 2021-01-25 Duggirala Meher Krishna , Duggirala Ravi

This paper proposes a rapidly-exploring random trees (RRT) algorithm to solve the motion planning problem for hybrid systems. At each iteration, the proposed algorithm, called HyRRT, randomly picks a state sample and extends the search tree…

Robotics · Computer Science 2022-10-28 Nan Wang , Ricardo G. Sanfelice

Threshold Autoregressive (TAR) models have been widely used by statisticians for non-linear time series forecasting during the past few decades, due to their simplicity and mathematical properties. On the other hand, in the forecasting…

Machine Learning · Computer Science 2022-11-17 Rakshitha Godahewa , Geoffrey I. Webb , Daniel Schmidt , Christoph Bergmeir

The simulation of electrical discharges has been attracting a great deal of attention. In such simulations, the electric field computation dominates the computational time. In this paper, we propose a fast tree algorithm that helps to…

Computational Engineering, Finance, and Science · Computer Science 2018-07-04 Chijie Zhuang , Yong Zhang , Xin Zhou , Rong Zeng , Jinliang He , Lei Liu

In this paper, we present a theoretical and computational workflow for the non-parametric Bayesian inference of drift and diffusion functions of autonomous diffusion processes. We base the inference on the partial differential equations…

Computational Engineering, Finance, and Science · Computer Science 2024-11-05 Maximilian Kruse , Sebastian Krumscheid

We study the problem of probability distribution matching and sampling on near-term quantum computers, aiming to construct parameterized circuits that generate samples from a target distribution while minimizing resource overhead. This task…

Quantum Physics · Physics 2026-05-26 Nicholas S. DiBrita , Jason Han , Krishna Bhatia , Younghyun Cho , Hengrui Luo , Tirthak Patel

Path planning through complex obstacle spaces is a fundamental requirement of many mobile robot applications. Recently a rapid convergence path planning algorithm, Batch Informed Trees (BIT*), was introduced. This work serves as a concise…

Robotics · Computer Science 2023-03-14 James Swedeen , Greg Droge

Given i.i.d. data from an unknown distribution, we consider the problem of predicting future items. An adaptive way to estimate the probability density is to recursively subdivide the domain to an appropriate data-dependent granularity. A…

Probability · Mathematics 2009-12-30 Marcus Hutter

When solving ill-posed inverse problems, one often desires to explore the space of potential solutions rather than be presented with a single plausible reconstruction. Valuable insights into these feasible solutions and their associated…

Computer Vision and Pattern Recognition · Computer Science 2024-05-27 Elias Nehme , Rotem Mulayoff , Tomer Michaeli

In this work, we present a novel sampling-based path planning method, called SPRINT. The method finds solutions for high dimensional path planning problems quickly and robustly. Its efficiency comes from minimizing the number of collision…

Robotics · Computer Science 2021-06-02 Daniel Rakita , Bilge Mutlu , Michael Gleicher

Combining the merits of both denoising diffusion probabilistic models and gradient boosting, the diffusion boosting paradigm is introduced for tackling supervised learning problems. We develop Diffusion Boosted Trees (DBT), which can be…

Machine Learning · Statistics 2024-06-05 Xizewen Han , Mingyuan Zhou

The kernel method is a potential approach to analyzing structured data such as sequences, trees, and graphs; however, unordered trees have not been investigated extensively. Kimura et al. (2011) proposed a kernel function for unordered…

Data Structures and Algorithms · Computer Science 2012-06-22 Daisuke Kimura , Hisashi Kashima

For an arbitrary initial configuration of discrete loads over vertices of a distributed graph, we consider the problem of minimizing the {\em discrepancy} between the maximum and minimum loads among all vertices. For this problem, this…

Data Structures and Algorithms · Computer Science 2018-05-15 Takeharu Shiraga

Recently proposed budding tree is a decision tree algorithm in which every node is part internal node and part leaf. This allows representing every decision tree in a continuous parameter space, and therefore a budding tree can be jointly…

Machine Learning · Computer Science 2014-12-22 Ozan İrsoy , Ethem Alpaydın

Drawing from the theory of stochastic differential equations, we introduce a novel sampling method for known distributions and a new algorithm for diffusion generative models with unknown distributions. Our approach is inspired by the…

Statistics Theory · Mathematics 2024-07-12 Xicheng Zhang

The adoption of the distributed paradigm has allowed applications to increase their scalability, robustness and fault tolerance, but it has also complicated their structure, leading to an exponential growth of the applications'…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-05-23 Ioannis Giannakopoulos , Dimitrios Tsoumakos , Nectarios Koziris

Fast exact algorithms are known for Hamiltonian paths in undirected and directed bipartite graphs through elegant though involved algorithms that are quite different from each other. We devise algorithms that are simple and similar to each…

Data Structures and Algorithms · Computer Science 2025-12-10 V. Arvind , Srijan Chakraborty , Samir Datta , Asif Khan

Simulating differential equations on classical computers becomes an intractable problem if the grid size is extremely large. Quantum computers are believed to achieve a possibly exponential speedup in the matrix operation. In this paper, we…

Quantum Physics · Physics 2025-03-18 Xinchi Huang , Hirofumi Nishi , Taichi Kosugi , Yoshifumi Kawada , Yu-ichiro Matsushita