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Dissipative particle dynamics (DPD) is a well-established mesoscale simulation method. However, there have been long-standing ambiguities regarding the dependence of its (purely repulsive) force field parameter on temperature as well as the…

Chemical Physics · Physics 2019-02-25 Peter Vanya , Jonathan Sharman , James A. Elliott

The interplay among solute and solvent molecules in lyotropic mesophases governs their physicochemical properties, such as phase behaviors and viscoelasticity. In our model system, a lyotropic chromonic liquid crystal (LCLC) made by…

Soft Condensed Matter · Physics 2024-09-10 Jiyong Cheon , Joonwoo Jeong

We investigate the behavior of a patchy particle model close to a hard-wall via Monte Carlo simulation and density functional theory (DFT). Two DFT approaches, based on the homogeneous and inhomogeneous versions of Wertheim's first order…

The low sliding friction of articular cartilage in the major joints , which is crucial for its homeostasis and for joint health, has been attributed to lipid bilayers forming lubricious boundary layers at its surface. The robustness of such…

Soft Condensed Matter · Physics 2023-09-06 Salome Mielke , Raya Sorkin , Jacob Klein

In this paper we employ all-electron \textit{ab-initio} time-dependent density functional theory based method to calculate the long range dipole-dipole dispersion coefficient (van der Waals coefficient) $C_{6}$ of sodium atom clusters…

Atomic and Molecular Clusters · Physics 2009-11-13 Arup Banerjee , Aparna Chakrabarti , Tapan K. Ghanty

A new computational model for Sodium Chloride, the NaCl/{\epsilon}, is proposed. The Force Fields employed here for the description of the NaCl is based on a set of radial particle-particle pair potentials involving Lennard-Jones (LJ) and…

Soft Condensed Matter · Physics 2018-07-11 Raul Fuentes-Azcatl , Marcia C. Barbosa

In the present work, we employ broadband dielectric spectroscopy to study the molecular dynamics of the prototypical glass former glycerol confined in two microporous zeolitic imidazolate frameworks (ZIF-8 and ZIF-11) with well-defined pore…

Disordered Systems and Neural Networks · Physics 2019-01-16 M. Uhl , J. K. H. Fischer , P. Sippel , H. Bunzen , P. Lunkenheimer , D. Volkmer , A. Loidl

We review our recent studies on selective solvation effects in phase separation in polar binary mixtures with a small amount of solutes. Such hydrophilic or hydrophobic particles are preferentially attracted to one of the solvent…

Soft Condensed Matter · Physics 2011-05-31 Akira Onuki , Ryuichi Okamoto , Takeaki Araki

Recent experiments on liquid water show collective dipole orientation fluctuations dramatically slower then expected (with relaxation time $>$ 50 ns) [D. P. Shelton, Phys. Rev. B {\bf 72}, 020201(R) (2005)]. Molecular dynamics simulations…

Soft Condensed Matter · Physics 2009-11-11 Pradeep Kumar , Giancarlo Franzese , Sergey V. Buldyrev , H. Eugene Stanley

Cholesterol (CHOL) is one of the most important components of plasma membranes of higher cells and one of the main factors for the formation of (nano)domains. In this work, molecular dynamics simulations of mixtures of CHOL with DPPC…

Biological Physics · Physics 2022-08-11 Fabian Keller , Andreas Heuer

This study combines broadband dielectric spectroscopy (BDS) experiments with molecular dynamics (MD) simulations to investigate the influence of nanoparticle (NP) inclusions on pretransitional phenomena in a liquid crystal (LC) host. We…

Soft Condensed Matter · Physics 2025-07-03 Szymon Starzonek , Krzysztof Górny , Zbigniew Dendzik , Dejvid Črešnar , Aleš Iglič

Bilayer electron-hole systems undergo excitonic condensation when the distance d between the layers is smaller than the typical distance between particles within a layer. All excitons in this condensate have a fixed dipole moment which…

Mesoscale and Nanoscale Physics · Physics 2009-11-11 Yogesh N. Joglekar , Alexander V. Balatsky , Michael P. Lilly

The presence and the properties of lipid bilayer nanometer-scale domains might be important for understanding the membranes of living cells. We used molecular dynamics (MD) simulations to investigate perturbations of a small patch of…

Soft Condensed Matter · Physics 2011-06-01 Frederick A. Heberle , David G. Ackerman , Gerald W. Feigenson

We report density functional theory (DFT) investigation of $B$-site doped CaFeO$_3$, a prototypical charge-ordered perovskite. At 290 K, CaFeO$_3$ undergoes a metal-insulator transition and a charge disproportionation reaction…

Materials Science · Physics 2016-08-15 Lai Jiang , Diomedes Saldana-Greco , Joseph T. Schick , Andrew M. Rappe

Zero Field Cooling (ZFC) and Field Cooling (FC) protocols are commonly used to investigate the properties of magnetic nanoparticle systems. For non-interacting conditions the particle properties are fairly well correlated with the shape of…

Mesoscale and Nanoscale Physics · Physics 2018-01-23 David Serantes , Manuel Pereiro , Roy Chantrell , Daniel Baldomir

Spherical confinement can alter the properties of a dipolar fluid in several different ways. In an atomistic molecular dynamics simulation study of two different dipolar liquids (SPC/E water and a model Stockmayer fluid) confined to…

Soft Condensed Matter · Physics 2019-04-12 Sayantan Mondal , Subhajit Acharya , Biman Bagchi

In hypersonic rarefied flows, insufficient intermolecular collisions cause significant deviations between translational and rotational temperatures, leading to strong thermal nonequilibrium. For diatomic gases such as nitrogen and oxygen,…

Fluid Dynamics · Physics 2026-02-10 Hao Jin , Sha Liu , Ningchao Ding , Sirui Yang , Huahua Cui , Congshan Zhuo , Chengwen Zhong

Transition metal complexes are ubiquitous in biology and chemical catalysis, yet they remain difficult to accurately describe with ab initio methods due to the presence of a large degree of dynamic electron correlation, and, in some cases,…

Despite much effort to probe the properties of dimethyl sulfoxide (DMSO) solution, effects of DMSO on water, especially near plasma membrane surfaces still remain elusive. By performing molecular dynamics (MD) simulations at varying DMSO…

Soft Condensed Matter · Physics 2017-02-01 Yuno Lee , Philip A. Pincus , Changbong Hyeon

In the present paper, the connection between surface order-disorder phase transitions and the percolating properties of the adsorbed phase has been studied. For this purpose, four lattice-gas models in presence of repulsive interactions…

Computational Physics · Physics 2009-11-13 M. Cecilia Gimenez , Felix Nieto , Antonio J. Ramirez-Pastor
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