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There are many cluster analysis methods that can produce quite different clusterings on the same dataset. Cluster validation is about the evaluation of the quality of a clustering; "relative cluster validation" is about using such criteria…

Methodology · Statistics 2020-09-10 Christian Hennig

Clustering is a widely used unsupervised learning method for finding structure in the data. However, the resulting clusters are typically presented without any guarantees on their robustness; slightly changing the used data sample or…

Machine Learning · Statistics 2017-01-02 Andreas Henelius , Kai Puolamäki , Henrik Boström , Panagiotis Papapetrou

Quality assessments of models in unsupervised learning and clustering verification in particular have been a long-standing problem in the machine learning research. The lack of robust and universally applicable cluster validity scores often…

Machine Learning · Statistics 2018-03-30 Luzie Helfmann , Johannes von Lindheim , Mattes Mollenhauer , Ralf Banisch

When scholars suspect units are dependent on each other within clusters but independent of each other across clusters, they employ cluster-robust standard errors (CRSEs). Nevertheless, what to cluster over is sometimes unknown. For…

Methodology · Statistics 2025-11-12 Kentaro Fukumoto

Estimating the number of clusters (K) is a critical and often difficult task in cluster analysis. Many methods have been proposed to estimate K, including some top performers using resampling approach. When performing cluster analysis in…

Methodology · Statistics 2019-09-05 Yujia Li , Xiangrui Zeng , Chien-Wei Lin , George Tseng

A popular method for selecting the number of clusters is based on stability arguments: one chooses the number of clusters such that the corresponding clustering results are "most stable". In recent years, a series of papers has analyzed the…

Machine Learning · Statistics 2010-07-08 Ulrike von Luxburg

One basic requirement of many studies is the necessity of classifying data. Clustering is a proposed method for summarizing networks. Clustering methods can be divided into two categories named model-based approaches and algorithmic…

Machine Learning · Computer Science 2013-02-19 Raheleh Namayandeh , Farzad Didehvar , Zahra Shojaei

Many clustering methods, including k-means, require the user to specify the number of clusters as an input parameter. A variety of methods have been devised to choose the number of clusters automatically, but they often rely on strong…

Methodology · Statistics 2017-02-10 Wei Fu , Patrick O. Perry

Determining the best partition for a dataset can be a challenging task because of 1) the lack of a priori information within an unsupervised learning framework; and 2) the absence of a unique clustering validation approach to evaluate…

Machine Learning · Computer Science 2021-04-06 Isotta Landi , Veronica Mandelli , Michael V. Lombardo

Model selection is a major challenge in non-parametric clustering. There is no universally admitted way to evaluate clustering results for the obvious reason that no ground truth is available. The difficulty to find a universal evaluation…

Machine Learning · Computer Science 2023-05-18 Alex Mourer , Florent Forest , Mustapha Lebbah , Hanane Azzag , Jérôme Lacaille

In cancer research, clustering techniques are widely used for exploratory analyses and dimensionality reduction, playing a critical role in the identification of novel cancer subtypes, often with direct implications for patient management.…

Validation plays a crucial role in the clustering process. Many different internal validity indexes exist for the purpose of determining the best clustering solution(s) from a given collection of candidates, e.g., as produced by different…

Machine Learning · Statistics 2026-02-23 Connor Simpson , Ricardo J. G. B. Campello , Elizabeth Stojanovski

As single-cell gene expression data analysis continues to grow, the need for reliable clustering methods has become increasingly important. The prevalence of heuristic means for method choice could lead to inaccurate reports if…

Quantitative Methods · Quantitative Biology 2026-05-19 Owen Visser , Somnath Datta

A learning classifier must outperform a trivial solution, in case of imbalanced data, this condition usually does not hold true. To overcome this problem, we propose a novel data level resampling method - Clustering Based Oversampling for…

Machine Learning · Computer Science 2018-11-13 Naman D. Singh , Abhinav Dhall

Missing values are largely inevitable in gene expression microarray studies. Data sets often have significant omissions due to individuals dropping out of experiments, errors in data collection, image corruptions, and so on. Missing data…

Quantitative Methods · Quantitative Biology 2018-09-18 Marie Li

Consider a population consisting of clusters of sampling units, evolving temporally, spatially, or according to other dynamics. We wish to monitor the evolution of its means, medians, or other parameters. For administrative convenience and…

Methodology · Statistics 2020-04-30 Jiahua Chen , Yukun Liu , James Zidek

This paper provides a new unimodality test with application in hierarchical clustering methods. The proposed method denoted by signature test (Sigtest), transforms the data based on its statistics. The transformed data has much smaller…

Machine Learning · Computer Science 2014-01-10 Mahdi Shahbaba , Soosan Beheshti

A new clustering accuracy measure is proposed to determine the unknown number of clusters and to assess the quality of clustering of a data set given in any dimensional space. Our validity index applies the classical nonparametric…

Methodology · Statistics 2022-02-15 Soumita Modak

Cluster analysis refers to a wide range of data analytic techniques for class discovery and is popular in many application fields. To judge the quality of a clustering result, different cluster validation procedures have been proposed in…

Methodology · Statistics 2022-01-11 Theresa Ullmann , Christian Hennig , Anne-Laure Boulesteix

Cluster analysis is an unsupervised learning strategy that can be employed to identify subgroups of observations in data sets of unknown structure. This strategy is particularly useful for analyzing high-dimensional data such as microarray…

Methodology · Statistics 2016-10-07 Erika S. Helgeson , Eric Bair
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