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Can we understand and predict the evolutionary pathways by which bacteria acquire multi-drug resistance (MDR)? These questions have substantial potential impact in basic biology and in applied approaches to address the global health…

Populations and Evolution · Quantitative Biology 2024-11-05 Jessica Renz , Kazeem A. Dauda , Olav N. L. Aga , Ramon Diaz-Uriarte , Iren H. Löhr , Bjørn Blomberg , Iain G. Johnston

Evolutionary algorithms have been frequently used for dynamic optimization problems. With this paper, we contribute to the theoretical understanding of this research area. We present the first computational complexity analysis of…

Data Structures and Algorithms · Computer Science 2015-04-27 Frank Neumann , Carsten Witt

Information can evolve as a physical consequence of non-equilibrium dynamics, even in the absence of genes, replication, or predefined fitness functions. We present Stability-Driven Assembly (SDA), a framework in which stochastic assembly…

Populations and Evolution · Quantitative Biology 2026-05-11 Dan Adler

The ability to track the optimum of dynamic environments is important in many practical applications. In this paper, the capability of a hybrid genetic algorithm (HGA) to track the optimum in some dynamic environments is investigated for…

Neural and Evolutionary Computing · Computer Science 2013-08-27 Quan Yuan , Zhixin Yang

We apply genetic programming techniques to the `shepherding' problem, in which a group of one type of animal (sheep dogs) attempts to control the movements of a second group of animals (sheep) obeying flocking behavior. Our genetic…

Artificial Intelligence · Computer Science 2016-03-22 Joshua Brulé , Kevin Engel , Nick Fung , Isaac Julien

We investigate the mutation-selection dynamics for an evolutionary computation model based on Turing Machines that we introduced in a previous article. The use of Turing Machines allows for very simple mechanisms of code growth and code…

Populations and Evolution · Quantitative Biology 2015-03-17 Fabio Musso , Giovanni Feverati

Robotic hardware designs are becoming more complex as the variety and number of on-board sensors increase and as greater computational power is provided in ever-smaller packages on-board robots. These advances in hardware, however, do not…

Neural and Evolutionary Computing · Computer Science 2007-06-05 D. A. Sofge , M. A. Potter , M. D. Bugajska , A. C. Schultz

Surrogate-assisted evolutionary algorithms (SAEAs) are recently among the most widely studied methods for their capability to solve expensive real-world optimization problems. However, the development of new methods and benchmarking with…

Neural and Evolutionary Computing · Computer Science 2024-02-27 Jakub Kudela , Ladislav Dobrovsky

Combinatorial designs provide an interesting source of optimization problems. Among them, permutation codes are particularly interesting given their applications in powerline communications, flash memories, and block ciphers. This paper…

Neural and Evolutionary Computing · Computer Science 2021-11-29 Luca Mariot , Stjepan Picek , Domagoj Jakobovic , Marko Djurasevic , Alberto Leporati

Evolutionary algorithms (EAs) have been well acknowledged as a promising paradigm for solving optimisation problems with multiple conflicting objectives in the sense that they are able to locate a set of diverse approximations of Pareto…

Neural and Evolutionary Computing · Computer Science 2016-06-17 Jianyong Sun , Hu Zhang , Aimin Zhou , Qingfu Zhang

Diversity is an important factor in evolutionary algorithms to prevent premature convergence towards a single local optimum. In order to maintain diversity throughout the process of evolution, various means exist in literature. We analyze…

Neural and Evolutionary Computing · Computer Science 2018-10-31 Thomas Gabor , Lenz Belzner , Claudia Linnhoff-Popien

We study possible applications of artificial neural networks to examine the string landscape. Since the field of application is rather versatile, we propose to dynamically evolve these networks via genetic algorithms. This means that we…

High Energy Physics - Theory · Physics 2017-09-13 Fabian Ruehle

The year of 2024 marks the 25th anniversary of the publication of evoloops, an evolutionary variant of Chris Langton's self-reproducing loops which proved constructively that Darwinian evolution of self-reproducing organisms by variation…

Cellular Automata and Lattice Gases · Physics 2024-12-11 Hiroki Sayama , Chrystopher L. Nehaniv

Evolutionary modeling applications are the best way to provide full information to support in-depth understanding of evaluation of organisms. These applications mainly depend on identifying the evolutionary history of existing organisms and…

Computational Engineering, Finance, and Science · Computer Science 2018-06-01 Sara Shehab , Sameh Abdulah , Arabi E. Keshk

Evolutionary change over time in the context of data pipelines is certain, especially with regard to the structure and semantics of data as well as to the pipeline operators. Dealing with these changes, i.e. providing long-term maintenance,…

Databases · Computer Science 2025-07-29 Kevin M. Kramer

It has recently been suggested that evolution exploits a form of fitness landscape smoothing within eukaryotic sex due to the haploid-diploid cycle. This short paper presents a simple modification to the standard evolutionary computing…

Neural and Evolutionary Computing · Computer Science 2019-03-29 Larry Bull

Threads as considered in basic thread algebra are primarily looked upon as behaviours exhibited by sequential programs on execution. It is a fact of life that sequential programs are often fragmented. Consequently, fragmented program…

Logic in Computer Science · Computer Science 2011-06-17 J. A. Bergstra , C. A. Middelburg

Evolutionary and bioinspired computation are crucial for efficiently addressing complex optimization problems across diverse application domains. By mimicking processes observed in nature, like evolution itself, these algorithms offer…

Neural and Evolutionary Computing · Computer Science 2025-01-14 Daniel Molina , Javier Del Ser , Javier Poyatos , Francisco Herrera

In this work we propose a fine grained approach with self-adaptive migration rate for distributed evolutionary computation. Our target is to gain some insights on the effects caused by communication when the algorithm scales. To this end,…

Neural and Evolutionary Computing · Computer Science 2024-01-31 Juan Luis Jiménez Laredo , Pedro A. Castillo , Antonio M. Mora , Juan Julián Merelo

Multi-agent AI systems need behavioral constitutions, but it is unresolved whether such rules should emerge internally through agent self-governance or be discovered externally through optimization. We present the first controlled…

Multiagent Systems · Computer Science 2026-05-12 Hershraj Niranjani , Ujwal Kumar , Phan Xuan Tan
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