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We report on numerical investigations concerning the propagation of solitons in a real DNA chain (the Human Adenovirus 2) using a realistic model of DNA torsional dynamics; this takes fully into account the inhomogeneities in the real…

Biomolecules · Quantitative Biology 2015-05-13 M. Cadoni , R. De Leo , S. Demelio , G. Gaeta

We study linear transmission and nonlinear soliton transport through quasi-periodic structures, which profiles are described by multiple modulation frequencies. We show that resonant scattering at mixed-frequency resonances limits…

Pattern Formation and Solitons · Physics 2007-05-23 Andrey A. Sukhorukov

This paper considers the propagation of excitons in linear chains of QDs with a side defect, located on a dielectric substrate. This configuration is suitable for spatially selective excitation of the system by pulsed optical radiation…

Mesoscale and Nanoscale Physics · Physics 2026-02-17 Aleksey Vlasov , Pavel Golovinski

We consider the interaction of a nonlinear Schrodinger soliton with a localized (point) defect in the medium through which it travels. Using numerical simulations, we find parameter regimes under which the soliton may be reflected,…

Pattern Formation and Solitons · Physics 2007-05-23 R. H. Goodman , P. J. Holmes , M. I. Weinstein

Solitons are localized nonlinear wave packets that propagate without spreading because nonlinearity balances dispersion. Their robustness is well understood in effectively one-dimensional systems, but introducing additional spatial…

Soliton dynamics in a large variety of longitudinally modulated lattices are studied in terms of phase space analysis for an effective particle approach and direct numerical simulations. Complex soliton dynamics are shown to depend strongly…

Pattern Formation and Solitons · Physics 2015-03-19 Panagiotis Papagiannis , Yannis Kominis , Kyriakos Hizanidis

We consider the reflectionless transport of Manakov solitons in networks. The system is modelled in terms of the Manakov system on metric graphs subject to transparent boundary conditions at the branching points. Simple constraints…

Exactly Solvable and Integrable Systems · Physics 2023-06-28 J. R. Yusupov , Kh. Sh. Matyokubov , M. Ehrhardt , D. U. Matrasulov

Solitons in a strongly nonlocal nonlinear medium have attracted considerable attention in recent years due to their unique and distinctive characteristics from those observed in the local nonlinear medium. In this work, we investigate the…

Pattern Formation and Solitons · Physics 2026-03-18 K L Mamatha , S Stalin , K Nithyanandan

Fundamental solitons pinned to the interface between three semi-infinite one-dimensional nonlinear dynamical chains, coupled at a single site, are investigated. The light propagation in the respective system with the self-attractive on-site…

Pattern Formation and Solitons · Physics 2015-05-28 M. Stojanovic , A. Maluckov , Lj. Hadzievski , B. A. Malomed

Soliton propagation dynamics under the presence of a complex potential are investigated. A large variety of qualitatively different potentials, including periodic, semi-infinite periodic and localized potentials, is considered. Cases of…

Pattern Formation and Solitons · Physics 2014-09-18 Yannis Kominis

Embedded solitons are exceptional modes in nonlinear-wave systems with the propagation constant falling in the system's propagation band. An especially challenging topic is seeking for such modes in nonlinear dynamical lattices (discrete…

Pattern Formation and Solitons · Physics 2021-02-17 Hadi Susanto , Boris A. Malomed

The problem of continuum percolation in dispersions of rods is reformulated in terms of weighted random geometric graphs. Nodes (or sites or vertices) in the graph represent spatial locations occupied by the centers of the rods. The…

Statistical Mechanics · Physics 2015-09-30 Avik P. Chatterjee , Claudio Grimaldi

We study the conductance of disordered graphene superlattices with short-range structural correlations. The system consists of electron- and hole-doped graphenes of various thicknesses, which fluctuate randomly around their mean value. The…

Mesoscale and Nanoscale Physics · Physics 2015-05-13 N. Abedpour , Ayoub Esmailpour , Reza Asgari , M. Reza Rahimi Tabar

The ability for real-time control of topological defects can open up prospects for dynamical manipulation of macroscopic properties of solids. A sub-category of these defects, formed by particle dislocations, can be effectively described…

Statistical Mechanics · Physics 2024-08-22 Oksana Chelpanova , Shane P. Kelly , Ferdinand Schmidt-Kaler , Giovanna Morigi , Jamir Marino

Transmission through a complex network of nonlinear one-dimensional leads is discussed by extending the stationary scattering theory on quantum graphs to the nonlinear regime. We show that the existence of cycles inside the graph leads to a…

Chaotic Dynamics · Physics 2012-12-20 Sven Gnutzmann , Uzy Smilansky , Stanislav Derevyanko

We consider an array of straight nonlinear waveguides constituting a two-dimensional square lattice, with a few central layers tilted with respect to the rest of the structure. It is shown that such configuration represents a line defect,…

Topological solitons can propagate without radiation in discrete media. These solutions are known as embedded solitons (ES). They come as isolated solutions and exist despite their resonance with the linear spectrum of the respective…

Pattern Formation and Solitons · Physics 2019-10-02 Yaroslav Zolotaryuk , Ivan O. Starodub

Random geometric graphs consist of randomly distributed nodes (points), with pairs of nodes within a given mutual distance linked. In the usual model the distribution of nodes is uniform on a square, and in the limit of infinitely many…

Disordered Systems and Neural Networks · Physics 2018-09-27 Carl P. Dettmann

Solitons have garnered significant attention across various fields, yet a contentious debate persists regarding the precise structure of solitons on indium chains. Currently, multiple forms of solitons in one-dimensional atomic chains have…

Materials Science · Physics 2023-11-21 Yu Yao , Chaojie Luo , Xiuxia Wang , Hui Zhang

We consider the reflectionless transport of solitons in networks. The system is modeled in terms of the nonlinear Schr\"odinger equation on metric graphs, for which transparent boundary conditions at the branching points are imposed. This…

Pattern Formation and Solitons · Physics 2020-06-11 J. R. Yusupov , K. K. Sabirov , M. Ehrhardt , D. U. Matrasulov