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A mathematical model of interacting species filling ecological niches left by the extinction of others is introduced. Species organize themselves into genera of all sizes. The size of a genus on average grows linearly with its age,…

Condensed Matter · Physics 2008-02-03 Susanna Manrubia , Maya Paczuski

In addition to the emergent complexity of patterns that appears when many agents come in interaction, it is also useful to characterize the dynamical processes that lead to their self-organization. A set of ergodic invariants is identified…

adap-org · Physics 2007-05-23 R. Vilela Mendes

The study of interactions between multiple species in an ecosystem is an active and impactful direction of inquiry. This is true in particular for fragile systems in which even small perturbations of their functional parameters can produce…

Populations and Evolution · Quantitative Biology 2025-01-14 Anca Radulescu , Richard Halpern , Drew Kozlowski , Conor O'Riordan

In this chapter we discuss how the results developed within the theory of fractals and Self-Organized Criticality (SOC) can be fruitfully exploited as ingredients of adaptive network models. In order to maintain the presentation…

Disordered Systems and Neural Networks · Physics 2014-04-28 Guido Caldarelli , Diego Garlaschelli

We introduce a framework for analyzing ordinary differential equation (ODE) models of biological networks using statistical model checking (SMC). A key aspect of our work is the modeling of single-cell variability by assigning a probability…

Quantitative Methods · Quantitative Biology 2018-12-05 Bing Liu , Benjamin M. Gyori , P. S. Thiagarajan

In this chapter of the e-book "Self-Organized Criticality Systems" we summarize some theoretical approaches to self-organized criticality (SOC) phenomena that involve percolation as an essential key ingredient. Scaling arguments, random…

Chaotic Dynamics · Physics 2012-07-24 Alexander V. Milovanov

We study the backwards Markov chain for the Bak-Sneppen model of biological evolution and derive its corresponding reversibility equations. We show that, in contrast to the forwards Markov chain, the dynamics of the backwards chain…

Probability · Mathematics 2020-10-02 Tom Alberts , Ga Yeong Lee , Mackenzie Simper

We show that spatial extensions of many-species population dynamics models, such as the Lotka-Volterra model with random interactions we focus on in this work, generically exhibit scale-free correlation functions of population sizes in the…

Statistical Mechanics · Physics 2025-12-09 Thibaut Arnoulx de Pirey

Many natural phenomena evolve intermittently, with periods of tranquillity interrupted by bursts of activity, rather than following a smooth gradual path. Examples include earthquakes, volcanic eruptions, solar flares, gamma-ray bursts, and…

Condensed Matter · Physics 2009-10-30 Per Bak , Stefan Boettcher

A hallmark in natural systems, self-organization often stems from very simple interaction rules between individual agents. While single-species self-propelled particle (SPP) systems are well understood, the behavior of binary mixtures with…

Soft Condensed Matter · Physics 2026-03-05 Eloise Lardet , Letian Chen , Thibault Bertrand

Extremal dynamics is the mechanism that drives the Bak-Sneppen model into a (self-organized) critical state, marked by a singular stationary probability density $p(x)$. With the aim of understanding this phenomenon, we study the BS model…

Statistical Mechanics · Physics 2015-06-24 Guilherme J. M. Garcia , Ronald Dickman

Multi-Objective Evolutionary Algorithms (MOEAs) have been proved efficient to deal with Multi-objective Optimization Problems (MOPs). Until now tens of MOEAs have been proposed. The unified mode would provide a more systematic approach to…

Neural and Evolutionary Computing · Computer Science 2011-02-01 Bojin Zheng , Yuanxiang Li

We introduce a new model for large scale evolution and extinction in which species are organized into food chains. The system evolves by two processes: origination/speciation and extinction. In the model, extinction of a given species can…

Statistical Mechanics · Physics 2007-05-23 Luis A. N. Amaral , Martin Meyer

We introduce the standard distribution width of fitness to characterize the global and individual features of a ecosystem in the Bak-Sneppen evolution model. Through tracking this quantity in evolution, a different hierarchy of avalanche…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Chaohong Lee , Xiwen Zhu , Kelin Gao

Complex change is often described as "evolutionary" in economics, policy, and technology, yet most system dynamics models remain constrained to fixed state spaces and equilibrium-seeking behavior. This paper argues that evolutionary…

Populations and Evolution · Quantitative Biology 2026-02-19 Dan Adler

Ecological systems comprise an astonishing diversity of species that cooperate or compete with each other forming complex mutual dependencies. The minimum requirements to maintain a large species diversity on long time scales are in general…

Populations and Evolution · Quantitative Biology 2012-09-10 Joachim Mathiesen , Namiko Mitarai , Kim Sneppen , Ala Trusina

A model of the universe as a self-organized critical system is considered. The universe evolves to a state independently of the initial conditions at the edge of chaos. The critical state is an attractor of the dynamics. Random metric…

General Relativity and Quantum Cosmology · Physics 2008-02-03 J. W. Moffat

Experimental observations of animal collective behavior have shown stunning evidence for the emergence of large-scale cooperative phenomena resembling phase transitions in physical systems. Indeed, quantitative studies have found scale-free…

Statistical Mechanics · Physics 2013-03-27 Gabriel Baglietto , Ezequiel V. Albano , Julián Candia

A multispecies artificial ecosystem is formulated using cellular automata with species interactions and food chain hierarchy. The constructed finite state automaton can simulate the complexity and self-organized characteristics of the…

Cellular Automata and Lattice Gases · Physics 2010-03-30 Xin-She Yang

The statistical properties of an ecosystem composed of species interacting via pairwise, random interactions and deterministic, concentration limiting self-interaction are studied analytically with tools of equilibrium statistical mechanics…

Disordered Systems and Neural Networks · Physics 2009-11-07 Viviane M. de Oliveira , J. F. Fontanari
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