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An important component in studying mathematical models in many biochemical systems, such as those found in developmental biology, is phase transition. The purpose of this work is to analyze the phase transition property of a…

Analysis of PDEs · Mathematics 2013-12-19 Masoud Yari

We consider a reaction-diffusion system including discontinuous hysteretic relay operators in reaction terms. This system is motivated by an epigenetic model that describes the evolution of a population of organisms which can switch their…

Analysis of PDEs · Mathematics 2015-08-12 Pavel Gurevich , Dmitrii Rachinskii

The Gierer-Meinhardt system occurs in morphogenesis, where the development of an organism from a single cell is modelled. One of the steps in the development, is the formation of spatial patterns of the cell structure, starting from an…

Analysis of PDEs · Mathematics 2021-08-31 Erika Hausenblas , Akash Ashirbad Panda

We study the discrete Gierer-Meinhardt model of reaction-diffusion on three different types of networks: regular, random and scale-free. The model dynamics lead to the formation of stationary Turing patterns in the steady state in certain…

Statistical Mechanics · Physics 2009-11-10 Subhasis Banerjee , Shrestha Basu Mallik , Indrani Bose

Understanding the physics of the integrable spin-1/2 XXZ chain has witnessed substantial progress, due to the development and application of sophisticated analytical and numerical techniques. In particular, infinite-temperature…

Statistical Mechanics · Physics 2025-08-08 Markus Kraft , Mariel Kempa , Jiaozi Wang , Sourav Nandy , Robin Steinigeweg

We characterize a transition from normal to ballistic diffusion in a bouncing ball dynamics. The system is composed of a particle, or an ensemble of non-interacting particles, experiencing elastic collisions with a heavy and periodically…

Statistical Mechanics · Physics 2018-04-04 André L. P. Livorati , Tiago Kroetz , Carl P. Dettmann , Iberê L. Caldas , Edson D. Leonel

This is a pedagogical account on reaction-diffusion systems and their relationship with integrable quantum spin chains. Reaction-diffusion systems are paradigmatic examples of non-equilibrium systems. Their long-time behaviour is strongly…

Statistical Mechanics · Physics 2007-05-23 Malte Henkel

Particle motion of a Lennard-Jones supercooled liquid near the glass transition is studied by molecular dynamics simulations. We analyze the wave vector dependence of relaxation times in the incoherent self scattering function and show that…

Soft Condensed Matter · Physics 2016-08-31 D. A. Stariolo , G. Fabricius

Diffusion within porous media, such as biological tissues, exhibits departures from conventional Fick's laws, which could result in space-fractional diffusion. The paper considers a reaction-diffusion system with two spatial compartments --…

General Mathematics · Mathematics 2025-11-12 Dimiter Prodanov

Effect of external periodic force on an oscillatory order in a reaction diffusion system (Gierer Meinhardt model) has been investigated. The 2:1 resonance situation is found susceptible for the generation of a band of phase instabilities.…

Pattern Formation and Solitons · Physics 2007-05-23 A. Bhattacharyay , J. K. Bhattacherjee

We scrutinize the anomalies in diffusion observed in an extended long-range system of classical rotors, the HMF model. Under suitable preparation, the system falls into long-lived quasi-stationary states presenting super-diffusion of rotor…

Statistical Mechanics · Physics 2009-11-11 Luis G. Moyano , Celia Anteneodo

We present the first example of a phase transition in a nonequilibrium steady-state that can be argued analytically to be first order. The system of interest is a two-species reaction-diffusion problem whose control parameter is the total…

Statistical Mechanics · Physics 2009-09-25 K. Oerding , F. van Wijland , J. -P. Leroy , H. J. Hilhorst

The main goal of this paper is to understand the formation of hexagonal patterns from the dynamical transition theory point of view. We consider the transitions from a steady state of an abstract nonlinear dissipative system. To shed light…

Mathematical Physics · Physics 2020-08-26 Taylan Şengül

Propagating intrinsic localised modes (discrete breathers) exist in the dissipative driven sine-Gordon chain as attractors of the dynamics. Thermal fluctuations induce random transitions between attracting configurations corresponding to…

Pattern Formation and Solitons · Physics 2007-05-23 Matthias Meister , Luis Vázquez

Molecular dynamics simulation has been used to model pattern formation in three-dimensional Rayleigh--Benard convection at the discrete-particle level. Two examples are considered, one in which an almost perfect array of hexagonally-shaped…

Other Condensed Matter · Physics 2009-11-11 D. C. Rapaport

The long-time behavior of a reaction-diffusion front between one static (e.g. porous solid) reactant A and one initially separated diffusing reactant B is analyzed for the mean-field reaction-rate density R(\rho_A,\rho_B) =…

Chemical Physics · Physics 2009-10-31 Martin Z. Bazant , Howard A. Stone

In the past the study of reaction-diffusion systems has greatly contributed to our understanding of the behavior of many-body systems far from equilibrium. In this paper we aim at characterizing the properties of diffusion limited reactions…

Statistical Mechanics · Physics 2015-05-14 Sven Dorosz , Michel Pleimling

Transitions from reversible to irreversible or fluctuating states above a critical density and shear amplitude have been extensively studied in non-thermal cyclically sheared suspensions and amorphous solids. Here, we propose that the same…

Statistical Mechanics · Physics 2026-01-21 C. Reichhardt , C. J. O. Reichhardt

One-dimensional reaction-diffusion systems are mapped through a similarity transformation onto integrable (and a priori non-stochastic) quantum chains. Time-dependent properties of these chemical models can then be found exactly. The…

Statistical Mechanics · Physics 2009-10-28 Malte Henkel , Enzo Orlandini , Jaime Santos

In this paper the Turing pattern formation mechanism of a two component reaction-diffusion system modeling the Schnakenberg chemical reaction coupled to linear cross-diffusion terms is studied. The linear cross-diffusion terms favors the…

Pattern Formation and Solitons · Physics 2017-05-08 G. Gambino , S. Lupo , M. Sammartino
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