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Autophagy is an intracellular degradation process that employs complex membrane dynamics to isolate and break down cellular components. However, many unanswered questions remain concerning remodeling of autophagic membranes. Here, we focus…

Subcellular Processes · Quantitative Biology 2019-03-25 Jaime Agudo-Canalejo , Roland L. Knorr

The rheological properties of biological tissues are core to processes such as cancer metastasis, wound healing and embryo development. The emergence of tissue and organ structures during morphogenesis requires the precise formation of…

Soft Condensed Matter · Physics 2026-03-10 Aidan J. Nicholas , Suzanne M. Fielding

We study the formation of hot spheroidal systems within the frame of a scenario where galaxy formation and evolution is related to the gentle mass aggregation history and primordial angular momentum of protogalaxies, both defined by the…

Astrophysics · Physics 2007-05-23 V. Avila-Reese , C. Firmani

We prove results on existence and uniqueness of solutions of a system of equations modeling the evolution of a generalized bioconvective flow. The mathematical model considered in the present work describes the convective motion generated…

Analysis of PDEs · Mathematics 2024-02-26 J. L. Boldrini , B. Climent-Ezquerra , M. A. Rojas-Medar , M. D. Rojas-Medar

We propose a unified mechanism that reproduces the sequence of dynamical transitions observed during somitogenesis, the process of body segmentation during embryonic development, that is invariant across all vertebrate species. This is…

Tissues and Organs · Quantitative Biology 2024-06-11 Chandrashekar Kuyyamudi , Shakti N. Menon , Sitabhra Sinha

Structured populations are ubiquitous across the biological sciences. Mathematical models of these populations allow us to understand how individual physiological traits drive the overall dynamics in aggregate. For example, linear age- or…

Analysis of PDEs · Mathematics 2022-04-25 Sabina L. Altus , Jeffrey C. Cameron , David M. Bortz

The early start to life naively suggests that abiogenesis is a rapid process on Earth-like planets. However, if evolution typically takes ~4Gyr to produce intelligent life-forms like us, then the limited lifespan of Earth's biosphere…

Earth and Planetary Astrophysics · Physics 2025-04-09 David Kipping

We present some existence results for three-dimensional quasistatic morphoelasticity. The state of the growing body is described by its deformation and the underlying growth tensor and is ruled by the interplay of hyperelastic energy…

Analysis of PDEs · Mathematics 2021-11-23 Elisa Davoli , Katerina Nik , Ulisse Stefanelli

Functionality of living cells is inherently linked to subunits with dimensions on the nanoscale. In case of osteoblasts the cell surface plays a particularly important role for adhesion and spreading which are crucial properties with regard…

Biological Physics · Physics 2020-11-30 C. Voelkner , M. Wendt , R. Lange , M. Ulbrich , M. Gruening , S. Staehlke , J. B. Nebe , I. Barke , S. Speller

Morphologies of genus-1 and 2 toroidal vesicles are studied numerically by dynamically triangulated membrane models and experimentally by confocal laser microscopy. Our simulation results reproduce shape transformations observed in our…

Soft Condensed Matter · Physics 2014-12-05 Hiroshi Noguchi , Ai Sakashita , Masayuki Imai

We discuss the formation of graded morphogen profiles in a cell layer by nonlinear transport phenomena, important for patterning developing organisms. We focus on a process termed transcytosis, where morphogen transport results from binding…

Other Quantitative Biology · Quantitative Biology 2007-05-23 T. Bollenbach , K. Kruse , P. Pantazis , M. González-Gaitán , F. Jülicher

We present photometric analysis of a local sample of 14 isolated pairs of galaxies. The photometric properties analyzed in the local pairs are: colors, morphology, tidal effects and activity. We verify that close pairs have an excess of…

Astrophysics · Physics 2009-10-30 Selma Junqueira , Duilia F. de Mello , Leopoldo Infante

Anisotropic collective patterns occur frequently in the morphogenesis of 2D biofilms. These patterns are often attributed to growth regulation mechanisms and differentiation based on gradients of diffusing nutrients and signalling…

Biological Physics · Physics 2017-10-11 Cameron Zachreson , Xinhui Yap , Erin S. Gloag , Raz Shimoni , Cynthia B. Whitchurch , Milos Toth

A one-dimensional cellular automaton with a probabilistic evolution rule can generate stochastic surface growth in $(1 + 1)$ dimensions. Two such discrete models of surface growth are constructed from a probabilistic cellular automaton…

Statistical Mechanics · Physics 2015-06-25 Pratip Bhattacharyya

Morphogenesis is a tightly regulated process that has been studied for decades. We are developing data-based and image-basd mechanistic models for a range of developmental processes with a view to integrate the available knowledge and to…

Quantitative Methods · Quantitative Biology 2013-09-10 Denis Menshykau , Srivathsan Adivarahan , Philipp Germann , Lisa Lermuzeaux , Dagmar Iber

We take advantage of the largest high-resolution simulation of cosmic structure growth ever carried out -- the Millennium Simulation of the concordance LambdaCDM cosmogony -- to study how the star formation histories, ages and metallicities…

Biofilm growth changes many physical properties of porous media such as porosity, permeability and mass transport parameters. The growth depends on various environmental conditions, and in particular, on flow rates. Modeling the evolution…

The Hubble tuning fork diagram, based on morphology, has always been the preferred scheme for classification of galaxies and is still the only one originally built from historical/evolutionary relationships. At the opposite, biologists have…

Astrophysics · Physics 2016-01-27 Didier Fraix-Burnet

The topology and form finding of tensegrity structures have been studied extensively since the introduction of the tensegrity concept. However, most of these studies address topology and form separately, where the former represented a…

Computational Geometry · Computer Science 2019-02-27 Omar Aloui , Jessica Flores , David Orden , Landolf Rhode-Barbarigos

When phospholipids crystallize within the otherwise fluid membranes of giant unilamellar vesicles, the resulting molecularly-thin "2D" solids exhibit great variety in their morphology evolution. For instance within membranes containing…

Soft Condensed Matter · Physics 2026-02-06 Hao Wan , Geunwoong Jeon , Gregory M. Grason , Maria M. Santore
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