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Spatial distribution of the human population is distinctly heterogeneous, e.g. showing significant difference in the population density between urban and rural areas. In the historical perspective, i.e. on the timescale of centuries, the…

Adaptation and Self-Organizing Systems · Physics 2022-08-30 Anna Zincenko , Sergei Petrovskii , Vitaly Volpert

Neuronal morphology is an essential element for brain activity and function. We take advantage of current availability of brain-wide neuron digital reconstructions of the Pyramidal cells from a mouse brain, and analyze several emergent…

Dynamical Systems · Mathematics 2018-10-09 Congping Lin , Yuanfei Huang , Tingwei Quan , Yiwei Zhang

The actin cortex of an animal cell is a thin polymeric layer attached to the inner side of the plasma membrane. It plays a key role in shape regulation and pattern formation on the cellular and tissue scale and, in particular, generates the…

Biological Physics · Physics 2022-08-24 M. Bonati , L. D. Wittwer , S. Aland , E. Fischer-Friedrich

We estimate density of defects frozen into a biological Turing pattern which was turned on at a finite rate. A self-locking of gene expression in individual cells, which makes the Turing transition discontinuous, stabilizes the pattern…

Biological Physics · Physics 2007-05-23 Jacek Dziarmaga

We model the elasticity of the cerebral cortex as a layered material with bending energy along the layers and elastic energy between them in both planar and polar geometries. The cortex is also subjected to axons pulling from the underlying…

Soft Condensed Matter · Physics 2016-02-09 O. V. Manyuhina , David Mayett , J. M. Schwarz

Pattern formation from homogeneity is well-studied, but less is known concerning symmetry-breaking instabilities in heterogeneous media. It is nontrivial to separate observed spatial patterning due to inherent spatial heterogeneity from…

Pattern Formation and Solitons · Physics 2019-12-10 Andrew L. Krause , Václav Klika , Thomas E. Woolley , Eamonn A. Gaffney

A single axon can generate branches connecting with plenty synaptic targets. Process of branching is very important for making connections in central nervous system. The interstitial branching along primary axon shaft occurs during nervous…

Neurons and Cognition · Quantitative Biology 2013-04-25 Y. Suleymanov , F. Gafarov , N. Khusnutdinov

Gradual disruption of the actin cytoskeleton induces a series of structural shape changes in cells leading to a transformation of cylindrical cell extensions into a periodic chain of "pearls". Quantitative measurements of the pearling…

Biological Physics · Physics 2010-08-06 Roy Bar-Ziv , Tsvi Tlusty , Elisha Moses , Samuel A. Safran , Alexander Bershadsky

Structured internal representations (cognitive maps) shape cognition, from imagining the future and counterfactual past, to transferring knowledge to new settings. Our understanding of how such representations are formed and maintained in…

Neurons and Cognition · Quantitative Biology 2024-10-07 Matthew M Nour , Yunzhe Liu , Mohamady El-Gaby , Robert A McCutcheon , Raymond J Dolan

Nature is intrinsically heterogeneous, and remarkable phenomena can only be observed in the presence of intrinsically nonlinear heterogeneities. Spontaneous pattern formation in nature has fascinated humankind for centuries, and the…

Pattern Formation and Solitons · Physics 2025-03-24 Juan F. Marín , Rafael Riveros Ávila , Saliya Coulibaly , Majid Taki , Mónica A. García-Ñustes

The emergence of macroscopic order and patterns is a central paradigm in systems of (self-)propelled agents, and a key component in the structuring of many biological systems.The relationships between the ordering process and the underlying…

Soft Condensed Matter · Physics 2020-12-02 Jonas Denk , Erwin Frey

We propose a general mechanism of multiple-Q ordering with noncollinear and noncoplanar spin textures in itinerant magnets. By analyzing the fourth-order perturbation with respect to the spin-charge coupling, we find that the instability…

Strongly Correlated Electrons · Physics 2014-09-01 Satoru Hayami , Yukitoshi Motome

We demonstrate that the space-time statistics of the birth of turbulent spots in boundary layers can be reconstructed qualitatively from the average behavior of macroscopic measures in the transition zone. The conclusion in \cite{vg04} that…

Fluid Dynamics · Physics 2021-02-03 N. Vinod , Rama Govindarajan

Motivated by the formation of ring-like filament structures in the cortex of plant and animal cells, we study the dynamics of a two-dimensional layer of cytoskeletal filaments and motor proteins near a surface by a general continuum theory.…

Subcellular Processes · Quantitative Biology 2009-11-11 Alexander Zumdieck , Marco Cosentino Lagomarsino , Catalin Tanase , Karsten Kruse , Bela Mulder , Marileen Dogterom , Frank J"ulicher

Fully developed turbulence is a universal and scale-invariant chaotic state characterized by an energy cascade from large to small scales where the cascade is eventually arrested by dissipation. In this article, we show how to harness these…

Soft Condensed Matter · Physics 2024-04-09 Xander M. de Wit , Michel Fruchart , Tali Khain , Federico Toschi , Vincenzo Vitelli

Turing patterns are stationary, wave-like structures that emerge from the nonequilibrium assembly of reactive and diffusive components. While they are foundational in biophysics, their classical formulation relies on a single characteristic…

Soft Condensed Matter · Physics 2026-01-30 Siamak Mirfendereski , Ankur Gupta

We derive temporally shaped control pulses for the creation of long-distance entanglement in disordered spin chains. Our approach is based on a time-dependent target functional and a time-local control strategy that permits to ensure that…

Quantum Physics · Physics 2015-09-23 Jian Cui , Florian Mintert

The brain of mammals are divided into different cortical areas that are anatomically connected forming larger networks which perform cognitive tasks. The cat cerebral cortex is composed of 65 areas organised into the visual, auditory,…

Neurons and Cognition · Quantitative Biology 2015-03-10 Ewandson L. Lameu , Fernando S. Borges , Rafael R. Borges , Antonio M. Batista , Murilo S. Baptista , Ricardo L. Viana

The Turing instability is a paradigmatic route to patterns formation in reaction-diffusion systems. Following a diffusion-driven instability, homogeneous fixed points can become unstable when subject to external perturbation. As a…

Pattern Formation and Solitons · Physics 2015-09-02 Joseph D. Challenger , Raffaella Burioni , Duccio Fanelli

Labyrinthine patterns arise in two-dimensional physical systems submitted to competing interactions, ranging from the fields of solid-state physics to hydrodynamics. For systems of interacting particles, labyrinthine and stripe phases were…

Soft Condensed Matter · Physics 2015-12-16 Simon Merminod , Timothee Jamin , Eric Falcon , Michael Berhanu